Glucosamine-6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-4   PRO-5  8.5 8.3 0.1 1.7 26.9 27.5 17.9
 PRO-5   LEU-6  8.2 8.0 -16.1 19.8 113.1 116.4 34.8
 LEU-6   THR-7  5.7 5.4 7.7 -10.2 34.5 33.0 -49.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-135   GLY-136  3.8 3.8 5.5 -7.7 107.9 108.5 17.8
 GLY-136   GLY-137  7.0 6.9 -4.8 -3.2 9.3 8.2 117.9
 GLY-137   VAL-138  8.6 8.3 4.5 0.4 91.3 92.1 -8.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-143   ILE-144  17.0 16.7 -23.7 8.9 69.6 69.8 172.4
 ILE-144   ALA-145  14.5 13.8 -4.8 7.4 66.2 51.7 95.9
 ALA-145   PHE-146  14.6 14.0 -14.3 -1.7 104.4 111.5 -6.7
 PHE-146   ASN-147  18.4 17.8 18.6 -10.9 107.6 107.2 -49.0
 ASN-147   GLU-148  19.3 18.8 -57.0 15.2 142.8 148.6 -602.5
 GLU-148   PRO-149  22.1 21.3 4.0 18.9 78.1 88.3 107.9
 PRO-149   ALA-150  22.4 23.2 -14.6 11.7 48.3 45.7 121.7
 ALA-150   SER-151  24.4 25.6 1.1 -20.9 155.3 154.7 277.0
 SER-151   SER-152  22.5 23.1 -9.0 3.2 53.6 61.7 -46.6
 SER-152   LEU-153  22.5 23.0 -8.5 -1.8 88.4 92.5 -58.4
 LEU-153   ALA-154  19.6 20.6 11.2 -17.3 151.6 156.2 102.8
 ALA-154   SER-155  19.2 20.1 6.2 -12.1 95.2 111.2 69.7
 SER-155   ARG-156  19.6 19.8 1.1 13.9 110.8 113.7 9.5
 ARG-156   THR-157  17.7 17.8 11.2 -13.0 68.8 66.2 46.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-200   ILE-201  4.9 4.7 -4.8 2.7 55.3 55.6 64.4
 ILE-201   LEU-202  6.1 6.0 2.6 -8.0 151.8 151.9 96.2
 LEU-202   VAL-203  4.3 4.3 1.0 0.6 133.0 133.3 8.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-238   CYS-239  4.8 4.6 3.3 6.9 38.5 38.7 150.6
 CYS-239   ASP-240  4.9 4.8 2.5 -6.4 34.8 38.0 -73.1
 ASP-240   GLU-241  3.2 3.1 13.0 -8.9 44.5 46.3 -1.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-243   THR-244  8.2 8.4 0.6 -11.0 90.8 85.6 8.0
 THR-244   MET-245  10.1 10.1 -5.8 -6.7 43.3 38.8 179.9
 MET-245   GLU-246  11.9 11.6 8.4 3.1 81.8 83.5 -26.1
 GLU-246   LEU-247  15.3 15.1 -1.3 2.3 113.8 117.0 3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-259   ALA-260  14.3 13.9 7.9 3.8 56.5 51.1 147.1
 ALA-260   GLU-261  15.3 15.4 -18.4 9.8 62.6 65.7 89.1
 GLU-261   ASN-262  16.8 16.7 -30.9 38.1 53.6 58.9 -54.4
 ASN-262   ILE-263  13.6 13.7 -20.6 7.5 117.2 118.4 -85.1
 ILE-263   LYS-264  11.4 11.3 -4.7 -22.5 119.7 127.6 -212.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees