Response Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-127   LEU-128  6.8 7.7 5.8 6.4 120.3 126.4 -5.9
 LEU-128   MET-129  6.5 7.4 -10.8 -1.3 89.0 63.3 2.6
 MET-129   GLU-130  3.2 3.8 3.5 7.0 140.1 140.8 -7.1
 GLU-130   MET-131  2.0 4.0 -5.7 -5.4 24.2 33.5 8.4
 MET-131   VAL-132  3.8 6.4 6.2 3.3 103.2 116.1 -3.1
 VAL-132   MET-133  4.4 5.4 -7.8 17.2 81.1 60.0 -7.1
 MET-133   THR-134  2.8 1.8 -28.8 2.1 36.5 30.1 16.0
 THR-134   ARG-135  1.1 3.1 -141.5 53.6 34.6 36.9 56.6
 ARG-135   PRO-136  3.1 5.6 -34.7 -5.7 45.0 47.2 23.3
 PRO-136   ASN-137  3.8 5.1 20.8 -17.0 88.4 96.1 6.9
 ASN-137   PRO-138  7.4 7.9 -1.0 -8.1 64.5 51.1 1.8
 PRO-138   LEU-139  9.5 10.0 -14.5 18.7 41.8 34.5 -3.2
 LEU-139   THR-140  11.5 11.8 11.9 -17.2 148.6 141.2 6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees