60 Kda Chaperonin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-188   VAL-189  11.1 11.9 -7.9 -26.5 44.9 70.1 26.8
 VAL-189   VAL-190  8.3 8.4 -14.1 42.2 38.3 49.8 -19.9
 VAL-190   GLU-191  9.4 8.5 -35.1 -27.5 40.2 83.2 31.6
 GLU-191   GLY-192  8.0 6.9 4.0 -132.4 112.2 157.8 144.8
 GLY-192   MET-193  7.1 5.1 42.1 67.3 107.4 138.6 -59.8
 MET-193   GLN-194  6.0 5.7 -33.8 -14.1 82.9 77.5 5.7
 GLN-194   PHE-195  8.6 8.6 9.3 -8.3 121.7 115.7 -2.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-371   LEU-372  2.4 2.2 29.0 -39.8 87.2 78.6 -1.6
 LEU-372   ALA-373  1.2 1.6 27.3 -33.7 146.0 141.5 9.1
 ALA-373   GLY-374  3.1 3.2 -56.5 -27.2 39.4 33.1 79.1
 GLY-374   GLY-375  0.6 1.2 -77.0 144.0 79.2 97.8 -2.9
 GLY-375   VAL-376  4.3 2.7 -29.0 34.9 73.6 99.5 -8.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees