Sucrose Isomerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-53   HIS-54  3.8 4.1 9.6 -1.8 26.9 25.0 64.4
 HIS-54   TYR-55  1.4 1.9 0.4 4.7 52.3 50.5 6.5
 TYR-55   ALA-56  3.8 3.8 4.4 0.1 38.7 40.0 54.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-72   MET-73  2.7 2.3 -6.0 1.5 63.4 59.2 81.9
 MET-73   LYS-74  2.5 2.7 15.1 -2.9 146.2 146.5 -97.8
 LYS-74   GLU-75  2.2 2.8 -6.4 5.5 88.6 92.6 -23.4
 GLU-75   TYR-76  5.3 5.7 -9.9 11.7 117.1 120.0 50.7
 TYR-76   GLY-77  4.7 4.9 -15.5 10.8 63.2 62.7 25.2
 GLY-77   THR-78  4.1 4.1 -3.9 5.3 84.8 84.1 -19.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-96   MET-97  7.6 7.5 -3.6 1.5 61.2 61.2 -0.6
 MET-97   VAL-98  4.2 4.0 -13.1 18.2 135.4 135.9 36.2
 VAL-98   ASP-99  1.4 1.3 5.9 -20.1 117.4 115.1 113.6
 ASP-99   VAL-100  2.6 2.6 -8.4 4.0 106.5 107.4 -78.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-190   ASP-191  11.2 11.0 4.1 8.0 113.1 109.2 -24.5
 ASP-191   LYS-192  14.3 14.1 -3.4 -1.3 49.8 59.9 23.2
 LYS-192   GLY-193  12.4 12.2 -5.2 -6.1 125.1 129.3 -71.8
 GLY-193   VAL-194  12.3 12.3 6.8 2.8 60.1 65.1 -10.1
 VAL-194   SER-195  8.7 8.6 5.4 34.5 15.0 6.1 476.9
 SER-195   GLY-196  8.9 8.7 -33.7 -10.0 127.8 127.2 -317.2
 GLY-196   MET-197  5.3 5.2 14.9 3.1 118.1 122.1 -86.7
 MET-197   ARG-198  3.7 3.3 4.1 -0.7 53.2 55.2 24.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-275   MET-276  4.6 4.4 2.1 -1.7 71.9 71.8 14.5
 MET-276   ALA-277  1.1 1.2 -3.8 -3.7 68.7 67.0 4.9
 ALA-277   PHE-278  3.7 4.2 -5.9 7.2 61.4 68.0 9.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-308   VAL-309  11.4 11.6 -11.0 8.4 128.8 129.8 5.1
 VAL-309   ASP-310  9.1 9.5 -0.2 -0.2 72.6 71.3 -18.9
 ASP-310   ALA-311  7.1 7.4 -7.7 13.5 41.8 48.5 13.0
 ALA-311   ILE-312  6.6 6.7 -2.0 0.5 106.2 114.3 -62.1
 ILE-312   ALA-313  6.7 6.7 0.9 5.1 66.9 66.9 57.7
 ALA-313   GLY-314  3.2 3.1 2.3 -10.2 139.7 142.0 20.6
 GLY-314   GLU-315  1.7 1.9 1.5 -4.3 88.6 85.2 3.5
 GLU-315   TYR-316  2.0 2.2 -3.2 7.2 141.3 145.0 13.5
 TYR-316   GLY-317  4.2 4.4 3.1 -3.4 21.4 25.0 9.4
 GLY-317   TRP-318  2.2 2.4 -2.2 0.2 109.9 109.4 -37.9
 TRP-318   ASN-319  1.1 0.7 -3.9 9.4 129.4 126.9 23.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees