Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-74   LYS-75  12.7 9.6 -6.3 -0.1 141.8 133.6 -1.8
 LYS-75   MET-76  15.0 10.3 27.9 46.7 49.2 62.2 24.1
 MET-76   LYS-77  12.2 7.0 10.5 13.6 101.6 133.9 -7.5
 SER-81   GLU-82  0.8 0.6 -111.8 168.5 28.3 91.3 -25.0
 GLU-82   GLU-83  3.2 3.3 41.8 142.0 101.3 155.6 -90.7
 GLU-83   GLU-84  5.1 4.1 53.5 5.3 117.6 116.0 -22.8
 GLU-84   ILE-85  4.3 4.1 7.5 10.4 161.5 166.9 -8.9
 ILE-85   ARG-86  2.3 2.3 18.8 -7.7 124.5 122.6 -2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-91   PHE-92  9.6 10.3 3.3 15.4 22.4 22.7 -192.8
 PHE-92   ASP-93  7.2 8.0 11.2 -52.1 52.5 47.3 181.6
 ASP-93   LYS-94  8.1 9.7 2.0 40.9 91.7 114.4 -4.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-97   GLY-98  12.0 10.9 176.4 166.2 67.4 70.3 -1.7
 GLY-98   TYR-99  9.5 7.4 27.9 8.9 120.9 136.0 181.6
 TYR-99   ILE-100  6.7 5.6 -3.2 -9.6 81.8 69.2 -199.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-112   GLY-113  16.0 16.7 -162.9 -143.6 112.8 142.9 -171.0
 GLY-113   GLU-114  18.6 19.1 -135.2 98.8 106.8 146.2 163.9
 GLU-114   LYS-115  16.5 17.7 -0.8 -38.4 176.3 121.8 -17.5
 LYS-115   LEU-116  17.4 16.7 -10.8 12.3 107.9 120.3 1.6
 LEU-116   THR-117  14.3 13.4 17.9 3.8 15.4 40.8 16.7
 THR-117   ASP-118  13.3 11.4 34.2 -2.9 84.7 92.0 6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees