Natrin-1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-177   LEU-178  6.9 7.2 4.2 -0.5 124.1 122.6 -8.3
 LEU-178   CYS-179  4.4 4.6 -9.2 8.7 19.1 15.3 1.2
 CYS-179   THR-180  4.4 4.4 13.6 -19.6 109.5 107.6 12.0
 THR-180   ASN-181  5.9 5.5 -6.5 1.8 13.4 12.1 15.2
 ASN-181   PRO-182  4.2 4.0 3.7 -0.1 104.6 101.6 14.4
 PRO-182   CYS-183  2.6 1.8 -12.6 10.2 11.6 15.4 12.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-214   PHE-215  7.1 6.8 -8.0 20.3 100.8 96.1 20.2
 PHE-215   CYS-216  3.3 3.1 18.3 -46.0 135.5 141.9 106.9
 CYS-216   ARG-217  1.6 2.4 -24.4 24.3 89.1 83.3 -37.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees