Polyprotein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-324   PRO-325  8.5 8.7 -28.6 38.7 82.5 99.7 30.5
 PRO-325   PRO-326  8.9 8.5 -26.5 1.6 72.7 54.6 60.3
 PRO-326   GLY-327  8.4 8.2 37.2 -37.9 51.4 68.2 17.2
 GLY-327   SER-328  5.6 5.7 90.7 -63.8 71.9 67.7 88.1
 SER-328   VAL-329  3.5 2.8 43.5 -39.5 133.1 134.0 -66.4
 VAL-329   THR-330  1.3 1.5 52.7 -65.5 88.4 87.9 32.7
 THR-330   VAL-331  4.8 5.3 16.4 -40.7 37.6 43.8 -138.4
 VAL-331   PRO-332  7.2 7.6 -21.8 41.9 78.9 95.9 103.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 CYS-431   VAL-432  3.4 3.3 29.7 -21.2 42.2 36.7 30.4
 VAL-432   THR-433  4.1 4.4 6.7 -17.0 101.6 100.7 39.1
 THR-433   GLN-434  6.8 7.4 19.2 -10.3 56.8 60.9 50.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-449   THR-450  5.1 4.6 31.6 -6.0 45.0 42.3 167.7
 THR-450   VAL-451  1.7 1.5 -37.0 59.8 135.0 142.2 141.9
 VAL-451   PRO-452  1.9 2.3 -9.3 -11.0 138.9 131.2 -133.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-484   MET-485  8.7 8.2 129.0 -72.8 53.5 66.0 202.8
 MET-485   PHE-486  11.0 9.3 -31.2 -13.4 148.3 166.3 -315.5
 PHE-486   ASP-487  11.2 11.1 8.2 -22.5 45.5 58.2 -70.6
 ASP-487   SER-488  12.1 12.6 -10.3 11.9 94.0 95.0 35.4
 SER-488   SER-489  15.8 16.3 29.7 -28.5 47.4 39.9 -20.2
 SER-489   VAL-490  15.4 15.5 12.3 -13.9 112.6 106.2 18.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees