D-3-Phosphoglycerate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-97   SER-98  2.4 3.0 -50.5 14.5 10.6 14.7 176.3
 SER-98   ASN-99  3.3 3.5 -4.7 8.9 58.9 59.9 24.9
 ASN-99   ILE-100  2.2 2.4 -8.3 2.5 109.6 110.1 -15.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-285   ALA-286  2.9 2.5 28.3 -9.7 81.1 83.0 14.8
 ALA-286   GLU-287  2.1 2.2 4.7 -4.4 142.0 143.4 -40.3
 GLU-287   ALA-288  2.4 2.8 -8.2 11.3 34.1 35.3 22.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees