Adenylylsulfate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-23   ARG-24  2.7 1.8 165.8 -30.0 173.4 93.9 131.7
 ARG-24   GLY-25  2.9 3.6 26.0 25.5 106.8 62.6 5.9
 GLY-25   LEU-26  5.9 6.0 58.1 12.2 118.0 120.7 -30.7
 LEU-26   THR-27  8.3 8.3 -1.3 2.8 90.2 92.6 1.2
 THR-27   ILE-28  12.0 12.0 -0.7 3.6 108.5 109.4 -1.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-120   GLU-121  9.3 9.3 -11.7 0.1 101.7 94.2 4.7
 GLU-121   VAL-122  8.4 8.1 -10.8 4.4 131.8 130.1 3.6
 VAL-122   ALA-123  6.2 5.9 18.4 -46.3 116.1 107.9 0.1
 ALA-123   THR-124  2.5 2.4 -32.2 5.0 83.7 145.9 -15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-127   GLU-128  3.3 3.6 -7.0 11.8 42.7 88.4 1.5
 GLU-128   THR-129  3.6 4.0 -8.7 -33.8 105.2 103.1 -3.0
 THR-129   GLY-130  3.6 2.4 -3.4 -1.2 98.0 82.5 1.2
 GLY-130   LEU-131  4.3 3.7 -17.2 9.9 170.3 162.5 -3.4
 LEU-131   PRO-132  5.7 5.7 -14.4 -3.9 102.6 101.7 -6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees