Putrescine-Binding Periplasmic Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-135
ALA-136
2.3
2.2
-7.5
3.5
55.3
52.9
23.6
ALA-136
THR-137
1.4
1.4
5.6
0.0
52.4
53.5
34.6
THR-137
THR-138
5.0
5.0
0.4
-1.2
104.5
104.7
30.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-275
TRP-276
4.0
4.0
-15.7
25.5
63.9
62.3
-9.4
TRP-276
PHE-277
1.7
2.3
0.5
-0.3
62.5
70.3
43.1
PHE-277
ASP-278
3.1
3.2
-23.2
15.5
86.8
85.8
60.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-331
ASN-332
9.8
9.2
5.4
3.7
78.9
84.7
16.5
ASN-332
PRO-333
7.7
7.1
7.4
4.6
14.2
17.4
67.7
PRO-333
GLY-334
9.5
9.1
-9.4
2.4
120.9
122.8
-39.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees