Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-146   VAL-147  5.6 6.1 4.1 -12.9 52.4 52.1 -7.6
 VAL-147   GLN-148  8.0 7.9 11.4 -4.3 108.0 116.0 -3.3
 GLN-148   VAL-149  8.3 8.3 11.3 -10.6 77.3 89.9 -12.5
 VAL-149   ILE-150  4.9 4.7 3.5 8.6 16.4 24.3 51.5
 ILE-150   CYS-151  4.8 4.8 -3.1 7.3 109.2 95.9 1.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-211   ALA-212  13.5 14.4 12.7 -14.8 104.3 95.0 16.3
 ALA-212   VAL-213  16.4 16.9 9.1 20.0 133.8 121.5 -64.7
 VAL-213   SER-214  14.8 15.3 178.8 -106.9 153.9 154.4 -451.8
 SER-214   ASP-215  13.1 17.8 149.7 -7.2 121.7 87.9 1089.3
 ASP-215   MET-216  16.6 19.0 -152.3 14.3 64.3 61.8 -409.3
 MET-216   ASP-217  18.3 22.7 -1.1 83.9 41.4 16.5 -412.6
 ASP-217   GLY-218  15.8 21.6 -83.6 155.1 83.9 90.2 -89.3
 GLY-218   ASP-219  12.6 20.3 -3.2 49.9 72.5 90.7 -35.2
 ASP-219   ARG-220  12.1 16.6 170.9 -72.7 44.2 37.6 591.3
 ARG-220   LEU-221  12.2 14.2 -167.7 79.8 118.6 74.4 -76.6
 LEU-221   SER-222  9.6 10.8 30.3 10.4 119.1 119.4 -61.1
 SER-222   GLN-223  8.7 10.7 -2.6 0.0 121.5 124.1 10.9
 GLN-223   GLU-224  9.6 11.2 10.7 -1.4 76.7 89.3 17.9
 GLU-224   GLU-225  6.5 7.9 -5.8 4.2 129.3 126.3 -23.3
 GLU-225   LEU-226  4.4 6.1 -11.0 12.1 159.3 165.6 18.0
 LEU-226   VAL-227  6.8 7.8 -0.3 -3.0 113.9 110.2 -14.6
 VAL-227   ALA-228  7.1 7.4 -5.2 13.0 102.0 89.9 -1.1
 ALA-228   MET-229  3.8 3.9 -5.2 -0.3 143.6 143.8 -12.9
 MET-229   ALA-230  2.5 3.1 1.2 0.9 34.9 33.1 13.8
 ALA-230   MET-231  5.1 4.8 -4.3 -3.1 97.3 93.8 -6.0
 MET-231   LEU-232  5.6 5.1 10.2 -4.7 63.6 78.1 0.9
 LEU-232   LEU-233  3.2 2.3 10.7 -2.4 10.4 10.0 63.1
 LEU-233   LEU-234  1.8 1.2 -1.4 -0.6 124.0 121.1 -16.1
 LEU-234   ILE-235  5.6 4.9 -0.3 -8.5 99.4 83.8 -19.4
 ILE-235   ALA-236  7.0 6.5 2.5 -16.7 48.7 66.1 -48.9
 ALA-236   GLY-237  5.3 5.6 14.7 -32.4 21.7 1.0 -79.5
 GLY-237   HIS-238  5.0 4.5 11.9 13.2 69.4 54.3 37.9
 HIS-238   GLU-239  8.8 7.4 -56.6 66.1 93.4 104.8 49.6
 HIS-238   GLU-239  8.8 7.4 -56.6 66.1 93.4 104.8 49.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-238   GLU-239  8.8 7.4 -56.6 66.1 93.4 104.8 49.6
 HIS-238   GLU-239  8.8 7.4 -56.6 66.1 93.4 104.8 49.6
 GLU-239   THR-240  10.3 10.7 -42.6 64.3 108.4 113.7 59.5
 THR-240   THR-241  9.5 10.1 17.7 -9.5 6.2 10.7 22.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees