Actin-5c

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-185   THR-186  1.6 1.4 -2.2 -0.1 28.9 28.6 44.9
 THR-186   ASP-187  2.2 2.3 4.7 3.0 88.5 86.2 -20.2
 ASP-187   TYR-188  5.7 5.7 -10.8 6.9 89.2 82.9 -17.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-209   ARG-210  3.1 3.1 -7.1 5.3 59.5 61.2 10.9
 ARG-210   ASP-211  3.0 3.2 -5.7 6.0 128.7 129.3 -8.3
 ASP-211   ILE-212  3.5 3.7 3.5 -4.6 81.0 82.1 11.7
 ILE-212   LYS-213  1.4 1.5 2.5 -1.5 138.8 139.5 -1.9
 LYS-213   GLU-214  2.7 2.8 0.1 0.0 88.3 86.7 13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees