D-Maltodextrin Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-107   ILE-108  8.5 8.6 3.5 -4.4 23.1 29.5 -12.8
 ILE-108   ALA-109  8.8 8.7 -11.1 26.6 133.3 133.5 23.6
 ALA-109   VAL-110  5.5 5.4 5.8 -17.6 115.5 116.8 4.1
 VAL-110   GLU-111  1.7 1.8 23.3 -29.0 60.9 65.7 17.7
 GLU-111   ALA-112  3.2 2.2 9.5 -21.1 97.5 112.4 20.3
 ALA-112   LEU-113  5.3 5.2 19.1 -1.4 53.1 48.0 18.1
 LEU-113   SER-114  8.8 8.7 -1.3 -0.2 136.9 133.2 4.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-258   VAL-259  7.8 7.4 13.1 -12.0 123.8 124.6 6.1
 VAL-259   GLY-260  4.3 3.8 -1.8 0.7 123.6 117.8 8.6
 GLY-260   VAL-261  2.9 2.0 -17.0 -4.5 61.0 64.5 48.7
 VAL-261   LEU-262  2.9 2.7 7.0 -6.0 81.0 81.1 11.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-309   GLU-310  10.0 10.0 8.6 7.4 30.7 34.4 39.4
 GLU-310   LEU-311  9.0 9.2 -19.6 8.0 87.6 93.3 7.5
 LEU-311   ALA-312  5.7 5.8 3.3 97.9 79.2 79.6 153.9
 ALA-312   LYS-313  4.1 5.3 -109.2 -24.6 107.3 161.1 -111.3
 LYS-313   ASP-314  4.7 5.0 18.5 -19.7 76.3 84.0 13.5
 ASP-314   PRO-315  0.9 1.5 -3.8 -1.1 70.4 59.8 5.2
 PRO-315   ARG-316  3.5 4.5 5.5 -7.4 141.9 143.1 9.4
 ARG-316   ILE-317  3.9 4.1 3.2 -1.6 147.1 142.8 -10.4
 ILE-317   ALA-318  1.1 1.4 1.9 0.5 100.0 106.6 12.8
 ALA-318   ALA-319  4.6 5.0 2.4 1.2 120.0 124.8 -11.0
 ALA-319   THR-320  6.4 6.5 -10.5 3.3 16.6 18.9 12.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees