Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-11
LEU-12
17.8
17.9
10.4
-11.6
48.5
49.9
27.1
LEU-12
GLU-13
16.2
16.1
0.1
-0.7
111.5
107.5
-43.9
GLU-13
GLU-14
13.5
13.4
0.9
6.0
73.2
71.9
-26.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-21
SER-22
11.8
11.9
0.0
-7.9
128.6
126.6
352.3
SER-22
ASP-23
13.7
14.2
-12.8
16.5
35.8
40.4
-265.8
ASP-23
LYS-24
14.9
15.6
-10.3
0.4
90.6
94.3
-102.7
LYS-24
PRO-25
18.5
19.1
5.7
1.7
24.0
19.9
241.6
PRO-25
LEU-26
20.8
21.3
-10.6
13.3
132.7
130.8
109.0
LEU-26
TYR-27
20.4
20.5
-1.6
2.8
131.2
131.3
-151.3
TYR-27
GLY-28
23.0
23.1
5.0
-0.6
30.2
32.5
286.6
GLY-28
ASN-29
23.1
23.1
-1.8
-3.2
109.0
109.0
-199.7
ASN-29
ASP-30
20.1
20.0
6.7
-1.0
134.7
136.5
-213.9
ASP-30
ARG-31
18.4
18.6
1.5
-10.5
107.3
106.6
344.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-109
ILE-110
10.1
9.9
7.4
-14.8
53.5
56.0
-180.0
ILE-110
SER-111
13.7
13.5
-2.9
0.4
102.9
103.7
287.2
SER-111
ILE-112
15.1
15.1
-2.2
-0.8
132.0
130.2
-183.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
15.2
15.1
7.0
0.6
77.5
76.0
108.6
LEU-210
ILE-211
12.9
12.9
5.7
-10.7
31.4
33.4
-140.1
ILE-211
ASP-212
14.9
14.8
21.3
-28.1
51.2
52.6
-174.2
ASP-212
SER-213
12.0
12.0
-19.6
19.5
72.6
67.4
137.0
SER-213
LYS-214
8.2
8.3
-0.6
24.7
93.5
87.3
-172.0
LYS-214
GLY-215
7.7
8.1
-21.2
5.8
43.4
58.8
431.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees