Genome Polyprotein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-168   GLU-169  5.8 5.2 -12.4 -22.2 61.7 82.5 5.6  GLU-169   ARG-170  7.0 7.7 -160.4 -154.5 33.3 19.8 -22.9  GLU-177   VAL-178  9.4 10.2 137.1 23.6 124.0 163.9 -82.2  VAL-178   ASP-179  8.4 10.0 -50.4 -14.2 61.5 65.3 19.1  ASP-179   GLU-180  11.0 11.3 -41.6 23.7 45.9 27.2 9.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees