Nickel-Binding Periplasmic Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-197
VAL-198
12.4
11.8
10.2
0.0
81.4
85.8
4.3
VAL-198
ILE-199
14.7
14.1
3.7
-10.5
156.5
145.6
37.1
ILE-199
PRO-200
13.7
13.1
-8.3
-5.6
95.4
106.1
2.0
PRO-200
ASP-201
16.4
15.6
13.4
-1.4
112.0
115.5
2.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-211
GLY-212
2.9
2.7
-15.0
0.3
50.2
55.2
-19.1
GLY-212
ASP-213
4.1
4.0
4.1
4.8
123.1
116.6
3.0
ASP-213
ILE-214
6.3
6.4
-15.4
-2.3
19.0
5.6
218.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-215
LEU-216
3.4
3.5
13.1
5.8
62.9
55.2
149.8
LEU-216
LEU-217
1.0
1.2
-11.7
11.3
87.1
87.4
61.3
LEU-217
TYR-218
4.3
4.0
20.6
-27.7
43.7
37.1
-103.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-233
GLN-234
12.1
12.0
8.8
-9.0
58.4
62.2
8.1
GLN-234
ASN-235
14.0
13.9
-16.0
39.2
120.7
119.9
103.3
ASN-235
PRO-236
11.5
11.2
-3.6
7.0
57.3
57.9
-23.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-472
MET-473
11.1
11.1
-0.8
0.9
35.4
39.4
164.2
MET-473
VAL-474
9.8
9.4
22.4
-11.0
99.2
100.9
-178.4
VAL-474
VAL-475
6.5
6.1
-1.7
2.3
20.0
22.5
47.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-482
ILE-483
9.0
8.4
-6.4
0.5
60.6
64.2
-26.4
ILE-483
PRO-484
5.6
5.0
-20.3
5.2
34.1
37.9
91.2
PRO-484
TYR-485
5.6
5.1
-3.8
2.6
88.7
85.1
8.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees