Chorismate Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-10   LEU-11  11.7 11.7 -11.7 -5.7 68.3 59.0 50.7
 LEU-11   ARG-12  8.1 8.3 10.5 1.2 176.5 164.3 -62.3
 ARG-12   TYR-13  7.8 7.5 -14.9 0.5 70.9 82.7 24.7
 TYR-13   SER-14  4.7 3.8 -10.5 3.2 35.4 23.6 55.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-26   TRP-27  11.5 11.7 -30.5 42.4 53.7 69.3 -18.1
 TRP-27   LEU-28  8.1 7.9 31.2 8.8 41.0 42.9 219.5
 LEU-28   LEU-29  6.4 6.2 -82.1 80.3 116.6 121.7 -25.5
 LEU-29   LEU-30  8.6 8.7 -162.6 165.5 48.4 53.9 -6.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-32   SER-33  11.9 13.0 26.4 -109.1 137.9 114.0 364.5
 SER-33   MET-34  9.5 10.3 20.5 29.1 102.9 134.5 -158.7
 MET-34   THR-35  7.0 7.2 -17.9 -19.9 16.1 7.8 181.3
 THR-35   LYS-36  8.1 7.9 2.3 12.6 106.5 116.9 -30.6
 LYS-36   ARG-37  11.0 10.9 -17.6 8.9 100.6 86.2 27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees