Fab Fragment Of 8F5 Antibody Against Human Rhinovirus 3 Serotype 2 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-110   GLU-111  5.3 5.1 34.9 -51.5 81.9 93.8 -5.7
 GLU-111   LEU-112  1.9 2.2 -25.1 17.6 162.3 176.3 -8.5
 LEU-112   LYS-113  0.5 0.7 -8.9 58.5 116.4 122.7 59.7
 LYS-113   ARG-114  2.0 2.7 -3.1 18.9 121.9 100.7 46.8
 ARG-114   ALA-115  4.5 5.2 -5.6 -20.7 113.6 125.8 -7.8
 ALA-115   ASP-116  7.7 8.0 12.5 12.9 132.1 131.2 -25.1

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees