Nad-Dependent Deacetylase Sirtuin-3, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-150   PRO-151  12.1 12.6 11.9 -4.9 25.7 17.8 67.4
 PRO-151   SER-152  12.0 12.4 -1.5 7.2 112.0 110.8 -0.7
 SER-152   GLY-153  8.2 8.7 -12.5 27.1 102.9 102.4 -5.9
 GLY-153   ILE-154  9.7 10.4 -5.5 -37.2 44.5 35.7 130.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-200   PRO-201  5.9 6.8 1.1 3.3 126.3 135.5 3.6
 PRO-201   GLY-202  3.6 4.6 29.0 -30.4 156.5 162.2 62.3
 GLY-202   ASN-203  3.9 4.5 30.9 -31.0 124.3 122.8 1.2
 ASN-203   TYR-204  4.1 4.7 -31.0 33.5 76.2 80.2 -27.6
 TYR-204   LYS-205  2.4 3.5 1.1 -9.3 88.4 90.2 -0.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-246   ALA-247  3.8 4.0 -5.0 7.1 44.4 37.2 -6.3
 ALA-247   HIS-248  4.4 4.7 -28.6 11.5 94.6 85.1 55.2
 HIS-248   GLY-249  4.0 4.5 4.4 18.0 76.2 68.4 26.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-297   LEU-298  4.3 4.2 -4.3 -25.0 37.5 28.5 101.3
 LEU-298   PRO-299  2.9 3.0 15.1 -3.2 89.8 84.0 -9.7
 PRO-299   GLN-300  1.0 1.3 3.1 3.1 55.4 57.6 -16.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees