Transcriptional Regulator (Ntrc Family)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-156   SER-157  7.1 6.9 7.5 8.8 122.5 119.1 -104.8
 SER-157   CYS-158  3.8 3.5 -31.5 10.3 24.5 32.7 260.6
 CYS-158   ALA-159  5.8 5.2 51.4 -41.3 87.7 84.0 -16.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-164   ILE-165  8.5 8.2 40.5 -43.7 113.4 108.2 69.0
 ILE-165   THR-166  5.1 5.0 -24.5 21.4 7.6 8.0 30.1
 THR-166   GLY-167  5.3 5.7 0.8 -2.4 114.9 119.6 19.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-186   SER-187  5.2 4.9 13.5 6.1 64.6 59.5 86.4
 SER-187   LYS-188  5.1 5.1 -20.5 17.8 73.7 83.7 -16.5
 LYS-188   GLU-189  8.2 8.4 -9.2 14.6 105.1 108.1 35.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-309   LEU-310  6.5 6.1 -2.7 4.6 93.3 95.3 17.9
 LEU-310   ARG-311  9.3 8.8 1.2 2.1 121.9 121.4 -14.9
 ARG-311   GLU-312  10.9 10.5 14.0 -22.3 65.4 69.6 -75.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees