Mrna Capping Enzyme

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-234   LEU-235  11.3 11.2 0.4 -4.9 94.2 96.2 -7.0
 LEU-235   LYS-236  8.4 8.4 -10.3 -37.6 50.3 49.0 129.3
 LYS-236   PRO-237  5.3 5.7 -47.0 -16.1 60.7 86.1 -8.1
 PRO-237   GLY-238  3.7 3.1 -151.1 -173.6 112.6 63.4 5.7
 GLY-238   THR-239  2.8 1.1 164.6 -1.7 28.0 71.2 -461.5
 THR-239   HIS-240  2.1 4.1 144.7 17.0 93.3 34.5 260.3
 HIS-240   HIS-241  2.8 5.3 86.5 13.6 51.1 48.7 229.5
 HIS-241   THR-242  4.0 4.2 -21.7 1.5 97.4 117.6 -13.9
 THR-242   ILE-243  7.6 7.7 -9.9 0.0 151.9 144.0 -33.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-308   LYS-309  3.7 3.8 32.4 -27.9 49.3 56.2 -14.6
 LYS-309   THR-310  4.1 3.3 36.2 19.6 33.0 37.5 163.0
 THR-310   LEU-311  3.0 2.2 -14.2 -21.4 83.4 103.9 -37.3
 LEU-311   LEU-312  1.8 1.9 22.7 -8.9 89.8 85.4 -7.3
 LEU-312   ASN-313  2.2 3.6 -11.0 14.7 159.0 166.4 17.4
 ASN-313   ILE-314  2.7 3.1 -4.1 -7.3 120.8 127.0 -12.1
 ILE-314   GLU-315  2.6 2.6 8.2 -1.3 102.0 95.3 -15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees