Oligopeptide-Binding Protein Oppa

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-296   GLN-297  6.3 6.7 -1.6 8.1 171.2 166.9 28.8
 GLN-297   GLN-298  5.1 5.8 -6.8 -6.5 99.9 107.3 19.5
 GLN-298   ALA-299  3.2 4.4 1.3 -2.6 67.7 63.6 3.3
 ALA-299   MET-300  0.6 0.8 20.1 -3.1 22.9 25.7 34.5
 MET-300   TYR-301  1.7 1.3 -8.6 1.2 82.1 80.6 14.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 SER-474   LEU-475  7.6 6.9 11.9 -15.8 171.9 168.2 14.0
 LEU-475   ALA-476  6.1 5.1 -9.2 -6.1 57.2 70.0 27.6
 ALA-476   SER-477  5.6 4.5 12.5 3.4 91.0 100.6 -3.5
 SER-477   GLU-478  3.1 2.2 -23.9 23.7 38.1 27.4 32.9
 GLU-478   PRO-479  1.1 1.1 -34.1 -6.8 99.9 110.4 -39.3
 PRO-479   SER-480  3.7 3.7 69.7 -2.2 117.7 125.2 -101.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-542   LEU-543  4.3 4.5 3.8 -12.2 97.7 93.8 33.3
 LEU-543   ASN-544  1.6 2.5 4.2 -10.3 67.5 68.6 -5.4
 ASN-544   TYR-545  2.3 2.0 -8.1 18.1 131.1 126.8 35.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees