Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLN-64   ASP-65  16.0 16.2 -8.7 7.7 101.7 99.2 -3.7  ASP-65   ASP-66  19.2 19.3 -20.6 -13.2 36.5 29.0 470.3  ASP-66   VAL-67  20.3 19.7 30.6 -5.9 109.0 104.7 -307.7  VAL-67   ASN-68  23.9 23.5 13.4 -17.7 116.3 110.5 92.1  ASN-68   GLY-69  24.3 24.2 5.6 10.9 114.8 111.8 -153.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  THR-108   LEU-109  8.4 8.5 -4.4 3.6 123.1 122.0 -20.2  LEU-109   GLY-110  6.2 6.4 0.5 -3.5 124.8 122.6 -21.5  GLY-110   ILE-111  5.1 5.3 -0.1 12.0 129.6 133.3 117.9  ILE-111   SER-112  5.4 5.6 -4.6 8.3 102.2 103.6 -98.6  SER-112   ILE-113  8.6 8.8 9.4 -7.9 44.2 44.5 86.5  ILE-113   LEU-114  10.8 10.9 -8.6 10.9 153.9 153.7 -16.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-211   ILE-212  9.8 9.9 0.5 -1.6 43.2 45.2 -98.1  ILE-212   ASP-213  8.9 9.3 0.0 9.0 44.7 41.4 127.3  ASP-213   SER-214  5.8 6.3 11.0 -2.1 105.2 101.3 -37.8  SER-214   LYS-215  4.9 5.0 -0.3 -0.8 94.9 91.1 70.1  LYS-215   GLY-216  3.5 3.5 -15.3 21.9 54.4 55.8 -60.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees