L-3-Hydroxyacyl-Coa Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-198   CYS-199  6.9 6.3 -25.2 44.0 134.4 130.6 110.4
 CYS-199   LYS-200  6.4 5.5 19.2 -13.8 31.9 25.2 13.8
 LYS-200   ASP-201  6.8 6.4 -7.5 -3.9 112.8 117.2 -50.6
 ASP-201   THR-202  3.9 3.8 3.4 -1.3 52.7 50.3 17.7
 THR-202   PRO-203  4.6 4.3 -2.8 0.5 74.6 78.5 0.5
 PRO-203   GLY-204  4.8 4.5 -4.2 6.2 31.8 37.6 -17.5
 GLY-204   PHE-205  6.0 6.0 -4.8 2.1 43.1 40.4 13.7
 PHE-205   ILE-206  4.3 4.2 -1.5 -0.8 59.4 61.9 17.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees