Cyanovirin-N

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-48   TRP-49  11.2 11.2 6.3 -5.1 76.8 81.5 5.5
 TRP-49   GLN-50  8.6 8.5 -3.6 -4.8 83.3 85.6 0.8
 GLN-50   PRO-51  5.1 5.0 -20.6 -15.4 143.4 136.5 -39.5
 PRO-51   SER-52  3.2 2.8 26.5 -60.6 101.6 106.6 2.9
 SER-52   ASN-53  0.8 1.0 -173.5 23.9 97.6 150.5 157.2
 ASN-53   PHE-54  3.3 3.9 -162.3 68.7 95.6 90.9 54.0
 PHE-54   ILE-55  6.6 6.7 -39.1 11.3 139.2 145.6 -27.9
 ILE-55   GLU-56  8.1 7.0 -32.9 -3.4 152.3 147.5 -48.3

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees