Glyceraldehyde-3-Phosphate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-150
THR-151
5.3
5.1
-9.5
10.7
37.1
36.7
-44.5
THR-151
ASN-152
3.0
2.9
3.1
-4.0
74.2
74.3
-117.7
ASN-152
CYS-153
0.2
0.3
-5.7
12.9
99.7
100.1
121.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-205
SER-206
20.3
20.2
0.4
-5.5
82.1
83.6
2.5
SER-206
SER-207
17.9
17.8
-4.4
12.1
148.0
145.3
255.5
SER-207
THR-208
16.2
16.1
5.0
8.0
98.9
104.9
-281.9
THR-208
GLY-209
12.6
12.4
-3.0
17.8
157.5
153.8
426.2
GLY-209
ALA-210
10.7
10.6
-19.4
6.1
82.9
93.8
-372.3
ALA-210
ALA-211
7.4
7.3
-11.9
1.9
133.5
141.2
-195.2
ALA-211
LYS-212
7.5
7.2
7.5
-7.2
34.7
34.2
-33.8
LYS-212
ALA-213
7.5
7.5
-2.5
5.1
83.3
82.0
172.9
ALA-213
VAL-214
5.6
5.8
-7.3
9.5
95.3
96.9
17.4
VAL-214
GLY-215
2.3
2.4
-3.6
5.1
158.0
158.0
100.0
GLY-215
LYS-216
2.4
2.8
2.7
2.7
82.5
84.3
110.9
LYS-216
VAL-217
4.4
4.7
-17.8
13.3
64.8
72.4
-52.1
VAL-217
LEU-218
3.7
3.9
7.4
-1.7
61.4
58.4
-139.0
LEU-218
PRO-219
2.6
2.4
-7.7
6.0
148.8
150.7
52.8
PRO-219
GLU-220
2.1
2.1
4.1
-10.0
57.9
58.0
-138.3
GLU-220
LEU-221
3.1
2.7
15.3
-11.4
100.7
105.6
41.1
LEU-221
ASN-222
3.3
3.2
5.8
-12.0
80.4
82.7
-154.5
ASN-222
GLY-223
2.9
3.4
1.2
9.0
66.9
62.0
62.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-265
GLU-266
18.0
18.0
-18.8
15.0
102.5
103.4
-62.9
GLU-266
MET-267
15.5
15.7
4.3
-18.0
122.3
124.0
209.4
MET-267
LYS-268
12.4
12.6
-3.6
14.9
7.6
9.0
-433.9
LYS-268
GLY-269
14.0
14.2
9.0
-8.3
119.7
119.4
141.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-313
GLU-314
3.9
4.0
2.1
3.6
120.9
116.0
185.8
GLU-314
THR-315
3.3
3.4
0.2
1.9
93.3
87.8
12.4
THR-315
GLY-316
1.5
1.5
-1.5
-7.0
149.4
146.1
-248.7
GLY-316
TYR-317
2.1
2.3
11.3
-1.1
59.7
57.7
188.1
TYR-317
SER-318
3.1
3.0
-0.2
-3.1
63.4
65.4
6.7
SER-318
ASN-319
5.7
5.8
-5.8
12.5
93.6
92.8
79.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees