Kdp Operon Transcriptional Regulatory Protein Kdpe

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-117   ARG-118  2.6 3.1 40.2 -24.3 72.5 61.2 3.9
 ARG-118   HIS-119  5.6 5.9 34.7 -51.8 27.4 15.0 -8.8
 HIS-119   SER-120  7.4 6.2 -116.2 91.4 127.4 104.9 -14.3
 PRO-125   ASP-126  11.0 10.1 -17.6 -1.1 74.4 51.5 6.3
 ASP-126   PRO-127  14.5 13.2 4.3 4.2 58.3 66.5 1.0
 PRO-127   LEU-128  17.5 16.0 11.2 -18.7 61.0 70.8 0.4
 LEU-128   VAL-129  19.5 18.8 -1.0 4.1 91.6 87.0 1.2

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees