Hyaluronate Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-377   GLU-378  2.4 2.1 9.4 -16.1 73.4 71.3 -16.6
 GLU-378   GLN-379  1.7 1.6 10.6 9.7 60.8 54.8 111.1
 GLN-379   VAL-380  4.0 3.7 -16.1 -6.2 54.9 62.9 54.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-417   GLN-418  3.8 4.0 8.9 -0.8 59.3 57.6 -24.4
 GLN-418   LEU-419  1.2 1.3 3.7 -13.1 126.1 118.6 59.7
 LEU-419   LEU-420  1.5 1.4 3.2 7.2 107.1 104.2 5.2
 LEU-420   PRO-421  2.9 3.4 -8.3 11.3 116.8 116.1 24.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-428   PRO-429  9.6 10.2 -4.3 5.6 62.5 64.0 -15.6
 PRO-429   ILE-430  8.7 9.6 7.6 -4.0 48.0 50.7 14.2
 ILE-430   ASP-431  6.9 7.4 -14.6 26.2 91.3 105.0 27.2
 ASP-431   LYS-432  9.8 9.7 5.7 -18.0 122.6 124.8 53.0
 LYS-432   ASP-433  11.6 12.4 22.3 -22.0 59.2 67.5 -2.3
 ASP-433   LYS-434  12.4 12.4 28.1 -30.3 83.5 101.9 -4.6
 LYS-434   MET-435  8.9 9.3 -6.5 26.4 36.9 16.0 -95.7
 MET-435   GLN-436  8.8 10.2 -44.9 -6.7 76.7 86.7 34.9
 GLN-436   THR-437  12.5 13.7 24.0 -19.4 97.1 78.6 -20.8
 THR-437   MET-438  12.4 12.4 -19.4 0.7 27.3 33.7 109.9
 MET-438   TYR-439  11.1 10.9 -1.0 9.5 58.8 58.5 -4.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees