Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-103
PRO-104
6.6
6.6
-1.1
6.4
159.5
163.5
86.7
PRO-104
PHE-105
4.5
4.5
-5.7
0.0
139.4
135.7
-71.7
PHE-105
MET-106
5.9
6.1
3.5
4.6
54.7
54.1
36.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-213
LYS-214
7.7
7.5
4.5
-1.5
66.8
72.5
53.4
LYS-214
GLY-215
4.1
4.0
-10.3
14.5
49.2
50.0
-38.7
GLY-215
TYR-216
0.8
0.6
-3.6
-1.1
79.5
72.8
113.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-232
ALA-233
15.0
14.9
3.7
2.0
14.5
14.7
-18.7
ALA-233
ILE-234
15.6
15.6
5.0
1.6
62.4
63.0
73.5
ILE-234
LEU-235
12.0
12.0
6.5
-5.0
101.7
101.6
-7.6
LEU-235
GLN-236
12.5
13.1
-0.8
8.9
60.1
55.3
-93.3
LEU-235
GLN-236
12.5
13.1
-0.8
8.9
60.1
55.3
-93.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-235
GLN-236
12.5
13.1
-0.8
8.9
60.1
55.3
-93.3
LEU-235
GLN-236
12.5
13.1
-0.8
8.9
60.1
55.3
-93.3
GLN-236
LEU-237
15.9
16.4
-5.1
-6.0
12.2
21.3
110.8
LEU-237
GLN-238
14.5
14.5
1.9
-3.1
94.1
93.7
9.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-250
TRP-251
4.0
4.3
3.9
0.9
83.4
84.7
-39.2
TRP-251
ARG-252
2.8
2.8
-9.0
-11.3
142.0
141.2
-228.2
ARG-252
GLY-253
5.3
5.3
-7.6
64.3
140.4
138.4
474.9
GLY-253
ASN-254
5.3
4.3
13.3
11.7
65.5
32.2
219.2
ASN-254
GLY-255
7.8
5.7
19.9
19.7
117.3
97.6
-112.3
GLY-255
CYS-256
9.1
9.1
-75.1
1.8
127.2
93.8
-210.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees