Protein (Antigen 85-C)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-203   ARG-204  3.6 3.7 1.2 1.7 123.2 123.3 -1.0
 ARG-204   ILE-205  1.0 0.9 3.4 -0.4 148.5 148.1 0.8
 ILE-205   TRP-206  1.8 1.8 7.2 -8.9 132.9 131.7 2.2
 TRP-206   VAL-207  3.0 2.8 -3.2 1.3 33.3 32.3 -0.1
 VAL-207   TYR-208  2.1 1.9 6.3 -7.2 144.1 141.9 -5.8
 TYR-208   CYS-209  3.6 3.3 -9.8 1.5 38.7 31.8 29.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-225   PHE-226  9.0 7.8 -0.8 -1.7 58.7 88.1 4.9
 PHE-226   LEU-227  10.1 7.7 -6.9 -2.7 9.4 24.4 16.8
 LEU-227   GLU-228  10.9 8.8 10.5 -7.1 112.8 126.4 -5.1
 GLU-228   GLY-229  7.7 5.8 2.2 -3.0 94.3 72.6 -3.7
 GLY-229   LEU-230  6.0 3.5 6.5 -0.5 138.9 102.2 -5.3
 LEU-230   THR-231  8.7 6.8 -3.9 -32.5 26.8 17.8 77.8
 THR-231   LEU-232  7.3 6.6 36.7 7.4 107.2 113.0 -33.3
 LEU-232   ARG-233  3.8 3.2 7.9 -0.2 103.9 101.5 -1.7
 ARG-233   THR-234  6.6 6.3 -1.6 2.7 28.5 30.2 -3.1
 THR-234   ASN-235  8.3 7.9 -2.0 1.9 39.4 37.1 9.1
 ASN-235   GLN-236  5.1 4.9 -2.9 1.9 82.2 80.3 -0.1
 GLN-236   THR-237  5.8 5.8 -0.4 4.1 62.8 64.9 -5.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees