Phosphoenolpyruvate Carboxykinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-235   ASN-236  5.1 4.2 -3.2 8.4 158.1 155.5 26.7
 ASN-236   VAL-237  5.4 4.7 3.8 -6.0 56.4 51.2 2.0
 VAL-237   GLY-238  3.5 3.0 -10.5 8.6 130.4 132.2 -6.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-251   THR-252  14.7 15.0 -19.8 10.2 71.9 59.6 14.4
 THR-252   GLY-253  12.6 12.6 5.9 -40.7 164.6 163.7 188.8
 GLY-253   LYS-254  13.1 13.8 12.1 5.2 131.3 129.3 -64.8
 LYS-254   THR-255  10.2 10.4 -18.7 26.5 39.5 34.2 -33.9
 THR-255   THR-256  13.0 12.3 -3.2 2.4 57.2 45.9 16.3
 THR-256   LEU-257  15.3 14.7 -7.3 11.9 55.7 57.6 -22.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-263   ARG-264  9.1 7.9 -30.7 8.5 93.8 102.1 -26.7
 ARG-264   LEU-265  8.2 7.7 21.9 -11.7 23.5 23.1 59.0
 LEU-265   ILE-266  9.3 8.5 8.6 0.6 87.7 89.7 -24.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-355   LYS-356  6.4 7.0 11.2 -14.8 126.3 125.4 10.2
 LYS-356   VAL-357  6.4 6.6 -4.0 7.2 42.8 42.4 0.0
 VAL-357   ILE-358  5.0 5.3 18.5 -18.4 124.0 118.1 5.3
 ILE-358   PHE-359  6.6 6.6 -10.7 4.1 32.1 30.8 32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-405   SER-406  5.3 5.0 4.2 5.1 101.3 101.0 7.8
 SER-406   ALA-407  4.1 3.6 4.9 -11.0 126.6 119.3 22.8
 ALA-407   CYS-408  1.4 1.1 -4.6 -3.5 19.3 21.5 40.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-433   ALA-434  12.2 13.0 -6.3 0.4 81.6 81.0 14.5
 ALA-434   GLN-435  9.1 9.9 9.2 -7.0 128.3 130.8 -1.5
 GLN-435   ALA-436  10.3 10.8 0.5 -2.3 123.7 123.3 17.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees