Adenylate Kinase (E.C.2.7.4.3)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-115
ILE-116
3.2
3.6
-27.6
3.5
41.7
48.4
53.6
ILE-116
VAL-117
2.3
2.1
4.2
2.6
107.2
109.8
11.4
VAL-117
ASP-118
1.8
3.2
5.1
1.8
53.8
51.9
9.7
ASP-118
ARG-119
3.1
3.7
-14.6
2.5
96.7
91.0
-14.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-156
LYS-157
11.1
11.0
21.3
-24.5
61.5
63.4
-7.5
LYS-157
ASP-158
10.1
9.5
15.6
11.3
96.6
104.9
-9.2
ASP-158
ASP-159
6.4
6.0
-38.9
23.4
24.5
27.4
41.2
ASP-159
GLN-160
6.2
6.5
-84.7
82.5
74.7
88.0
13.5
GLN-160
GLU-161
6.0
8.0
-28.3
-14.2
86.4
77.0
14.6
GLU-161
GLU-162
5.2
7.6
11.1
6.2
39.6
42.7
21.7
GLU-162
THR-163
5.5
8.5
1.2
-4.4
59.8
60.7
-10.7
THR-163
VAL-164
2.4
5.3
-4.0
0.6
52.2
56.1
-2.7
VAL-164
ARG-165
0.5
3.3
-12.2
2.0
93.6
88.6
-3.5
ARG-165
LYS-166
4.2
6.2
14.5
-13.5
34.6
31.7
8.1
LYS-166
ARG-167
4.0
6.3
-1.7
5.3
79.7
96.1
1.2
ARG-167
LEU-168
3.9
3.8
-4.8
3.0
55.3
58.5
1.1
LEU-168
VAL-169
6.3
6.2
-2.5
-2.8
120.9
110.2
1.9
VAL-169
GLU-170
8.6
9.3
-2.8
9.4
122.7
139.1
-4.7
GLU-170
TYR-171
8.6
8.4
-6.1
-5.8
54.4
74.2
5.8
TYR-171
HIS-172
10.0
9.0
4.7
-9.6
97.9
108.6
1.1
HIS-172
GLN-173
12.3
11.9
0.4
18.3
41.7
48.6
17.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees