Atp Synthase Subunit Beta, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-132   LEU-133  9.0 8.6 -5.8 21.1 28.6 45.8 -17.1
 LEU-133   VAL-134  9.2 9.9 6.0 -11.1 83.9 89.6 52.3
 VAL-134   THR-135  9.8 10.4 1.2 -29.2 159.4 159.9 146.3
 THR-135   GLY-136  9.3 10.9 31.0 -4.4 113.8 80.6 -138.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-140   ASP-141  8.7 8.0 2.9 3.3 126.7 132.8 -45.4
 ASP-141   LEU-142  9.9 8.8 0.2 3.2 173.0 162.8 -35.1
 LEU-142   LEU-143  10.8 9.5 -1.0 -2.2 69.5 71.2 -11.0
 LEU-143   ALA-144  8.2 6.9 -1.1 -0.2 107.5 100.2 76.1
 ALA-144   PRO-145  5.2 3.8 56.3 -7.8 49.1 66.6 140.0
 PRO-145   TYR-146  6.7 4.3 25.6 -42.3 72.1 34.2 -111.6
 TYR-146   ALA-147  5.0 4.9 -32.7 9.7 68.7 81.3 61.3
 ALA-147   LYS-148  6.6 6.2 8.8 -24.0 27.1 31.7 -56.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-151   ILE-152  4.8 5.2 -0.3 2.2 121.6 120.8 9.0
 ILE-152   GLY-153  2.7 2.6 -4.8 -1.8 64.0 59.6 11.6
 GLY-153   LEU-154  6.0 5.7 0.1 0.2 91.8 85.5 74.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-157   ALA-158  15.7 15.4 -40.3 -25.3 156.7 143.9 -300.5
 ALA-158   GLY-159  15.5 13.8 25.3 24.7 74.5 60.5 91.5
 GLY-159   VAL-160  15.0 14.7 -42.7 -61.4 56.6 62.7 300.3
 VAL-160   GLY-161  16.6 16.8 -25.9 97.2 95.4 36.8 -248.9
 GLY-161   LYS-162  15.3 14.3 -75.6 2.9 71.4 91.4 -19.7
 LYS-162   THR-163  12.2 11.2 -1.4 -0.3 129.9 145.8 -44.3
 THR-163   VAL-164  10.7 10.4 2.5 2.7 83.8 86.3 33.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-172   VAL-173  11.6 11.9 1.3 1.5 96.3 86.3 -11.8
 VAL-173   ALA-174  9.9 9.8 -2.7 -0.7 134.3 136.1 38.0
 ALA-174   LYS-175  10.4 9.6 0.5 4.5 86.7 79.7 -42.6
 LYS-175   ALA-176  13.8 13.1 2.1 0.6 143.0 145.0 60.6
 ALA-176   HIS-177  14.4 14.0 0.7 0.3 110.3 112.0 10.0
 HIS-177   GLY-178  13.8 12.6 1.9 -11.2 35.5 52.8 -57.3
 HIS-177   GLY-178  13.8 12.6 1.9 -11.2 35.5 52.8 -57.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-177   GLY-178  13.8 12.6 1.9 -11.2 35.5 52.8 -57.3
 HIS-177   GLY-178  13.8 12.6 1.9 -11.2 35.5 52.8 -57.3
 GLY-178   GLY-179  14.5 13.6 -122.0 45.0 105.0 98.1 -83.4
 GLY-179   TYR-180  11.0 12.0 -76.5 105.3 157.7 101.0 211.6
 TYR-180   SER-181  8.6 9.1 22.2 -3.1 107.1 114.6 -85.1
 SER-181   VAL-182  4.9 5.4 -1.9 -3.5 132.3 136.5 -27.3
 VAL-182   PHE-183  3.7 4.0 4.1 -0.1 104.9 104.4 -17.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-205   ILE-206  10.3 10.8 18.6 3.5 125.8 113.9 -61.8
 ILE-206   ASN-207  8.1 8.1 -9.3 2.6 48.5 42.7 58.8
 ASN-207   LEU-208  10.2 10.5 1.8 -35.4 142.4 137.4 66.4
 LEU-208   LYS-209  9.3 9.2 -19.2 10.4 110.9 137.4 -13.1
 LEU-208   LYS-209  9.3 9.2 -19.2 10.4 110.9 137.4 -13.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-208   LYS-209  9.3 9.2 -19.2 10.4 110.9 137.4 -13.1
 LEU-208   LYS-209  9.3 9.2 -19.2 10.4 110.9 137.4 -13.1
 LYS-209   ASP-210  12.4 12.3 8.6 -13.6 117.3 105.9 34.4
 ASP-210   ALA-211  11.2 13.1 -14.5 9.7 72.0 58.4 124.6
 ALA-211   THR-212  8.2 9.9 -25.4 93.5 42.9 10.6 -289.6
 THR-212   SER-213  10.2 11.9 -17.6 22.8 65.5 46.1 24.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  6.8 7.0 -8.5 14.2 137.2 130.2 10.6
 ASP-330   ALA-331  4.1 4.5 16.7 -1.1 75.6 79.6 105.6
 ALA-331   THR-332  2.0 2.1 -0.4 -0.1 47.2 60.2 -7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-337   ALA-338  18.4 19.0 -0.1 0.5 57.9 62.8 6.2
 ALA-338   ILE-339  20.4 21.0 -1.9 2.4 87.2 96.4 15.2
 ILE-339   ALA-340  18.9 19.0 -0.9 -1.0 153.6 160.3 3.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-341   LEU-342  22.8 22.8 -0.6 -1.2 121.0 122.6 -5.5
 LEU-342   GLY-343  23.4 22.9 0.7 4.9 125.5 122.4 -25.6
 GLY-343   ILE-344  23.4 22.5 -34.9 34.3 83.5 85.9 52.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-345   PRO-346  18.5 17.5 0.6 -9.0 120.8 114.0 12.8
 PRO-346   ALA-347  15.7 14.8 -13.3 13.1 67.3 56.8 19.7
 ALA-347   VAL-348  15.9 15.7 -1.8 29.3 47.4 45.0 -111.2
 VAL-348   ASP-349  13.0 13.2 2.8 -21.0 137.6 129.1 86.6
 ASP-349   PRO-350  13.2 13.3 -1.3 -8.5 47.4 61.1 69.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees