Udp-Sugar Pyrophosphorylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-298   ILE-299  4.9 5.0 3.9 -13.1 160.8 158.7 39.8
 ILE-299   PRO-300  3.8 3.8 0.4 6.5 85.5 83.3 10.7
 PRO-300   ARG-301  2.2 2.6 -0.6 13.0 102.2 110.4 57.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-302   PRO-303  8.9 9.3 -15.0 20.2 27.7 30.0 -22.4
 PRO-303   LYS-304  11.0 11.3 -41.6 35.2 74.9 55.2 79.0
 LYS-304   GLU-305  13.1 13.5 -87.1 69.5 87.3 70.0 125.6
 GLU-305   PRO-306  11.6 12.0 9.4 1.3 159.6 149.8 -103.7
 PRO-306   ILE-307  12.4 12.3 12.4 -1.5 98.1 91.8 -21.3
 PRO-306   ILE-307  12.4 12.3 12.4 -1.5 98.1 91.8 -21.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-306   ILE-307  12.4 12.3 12.4 -1.5 98.1 91.8 -21.3
 PRO-306   ILE-307  12.4 12.3 12.4 -1.5 98.1 91.8 -21.3
 ILE-307   GLY-308  9.0 8.9 -1.4 -1.6 62.1 60.1 -6.5
 GLY-308   LEU-309  6.2 6.1 13.6 -10.2 59.5 57.8 18.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-323   ALA-324  5.4 6.0 10.6 -14.6 84.1 77.7 -1.6
 ALA-324   ASN-325  2.5 3.1 -6.4 8.0 51.7 55.6 -6.4
 ASN-325   VAL-326  2.6 2.5 9.9 12.7 57.6 53.0 117.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-337   LEU-338  16.6 17.0 -61.8 88.1 89.2 95.3 -2.3
 GLY-351   PHE-352  9.4 10.7 -7.7 -12.8 29.7 48.9 121.3
 PHE-352   SER-353  7.2 7.9 7.1 -10.4 137.0 151.7 1.3
 SER-353   PRO-354  7.5 7.6 -5.2 7.0 96.2 88.7 -77.6
 PRO-354   PHE-355  7.3 7.8 -4.3 -25.6 59.5 77.7 74.4
 PRO-354   PHE-355  7.3 7.8 -4.3 -25.6 59.5 77.7 74.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-354   PHE-355  7.3 7.8 -4.3 -25.6 59.5 77.7 74.4
 PRO-354   PHE-355  7.3 7.8 -4.3 -25.6 59.5 77.7 74.4
 PHE-355   PRO-356  4.4 4.3 33.9 0.2 66.6 64.1 109.3
 PRO-356   GLY-357  0.9 0.8 -6.9 14.8 52.9 58.6 -28.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees