Acriflavine Resistance Protein B

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-131   SER-132  24.5 23.8 44.5 59.5 63.9 73.9 142.3
 SER-132   SER-133  21.1 21.7 -35.3 -76.3 137.9 132.8 -515.5
 SER-133   SER-134  19.3 18.5 -2.5 -44.0 60.4 86.1 47.4
 SER-134   SER-135  18.7 15.5 21.4 -9.5 93.4 77.1 -14.2
 SER-135   PHE-136  15.0 13.2 -41.1 -15.2 59.1 42.6 181.4
 PHE-136   LEU-137  12.0 11.1 16.0 0.1 51.4 57.3 60.6
 LEU-137   MET-138  11.4 10.8 4.7 -5.1 97.2 100.8 -8.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-180   GLN-181  10.0 10.4 18.0 3.2 49.1 50.3 41.1
 GLN-181   TYR-182  9.4 9.5 13.2 12.2 31.6 46.1 128.1
 TYR-182   ALA-183  8.6 8.6 7.7 5.2 61.2 69.4 2.0
 ALA-183   MET-184  11.4 11.5 -9.3 -0.2 149.6 150.0 -26.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-280   PHE-281  7.6 8.1 -6.1 -1.0 144.8 147.8 -17.5
 PHE-281   ASN-282  5.9 6.6 -9.0 8.9 104.4 91.7 -11.9
 ASN-282   GLY-283  8.8 9.9 5.4 -16.2 137.1 149.8 40.8
 GLY-283   GLN-284  11.0 11.5 11.5 -4.3 158.0 148.0 -44.4
 GLN-284   PRO-285  9.1 8.8 -16.9 1.3 67.1 77.7 35.2
 PRO-285   ALA-286  7.0 6.6 7.5 2.3 69.5 64.7 25.0
 ALA-286   SER-287  3.7 3.7 -20.1 -3.3 72.4 77.5 25.2
 SER-287   GLY-288  3.4 3.3 2.9 3.5 37.8 40.6 29.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-331   PHE-332  7.8 8.4 -2.2 3.0 17.7 25.5 -3.5
 PHE-332   VAL-333  6.5 6.4 -7.9 -1.9 60.8 63.2 33.6
 VAL-333   LYS-334  10.2 9.9 20.1 -9.0 105.9 111.1 -1.5
 LYS-334   ILE-335  11.6 11.8 9.1 5.6 137.6 156.1 -62.1
 ILE-335   SER-336  9.2 9.7 -6.5 13.4 24.1 42.9 -37.6
 SER-336   ILE-337  8.5 9.8 -3.8 -7.2 61.6 71.0 47.7
 ILE-337   HIS-338  12.3 13.6 12.8 -13.8 109.8 121.5 -4.3
 HIS-338   GLU-339  12.9 13.8 -6.4 -0.3 36.0 24.1 26.5
 GLU-339   VAL-340  10.2 11.2 1.8 -1.9 146.1 127.9 11.8
 VAL-340   VAL-341  11.7 13.2 -4.4 -5.0 78.4 71.1 8.4
 VAL-341   LYS-342  15.1 16.5 -0.9 8.1 57.8 45.6 -28.9
 LYS-342   THR-343  14.1 15.1 1.7 1.1 165.6 153.7 -12.9
 THR-343   LEU-344  12.3 13.5 -18.7 -2.7 61.3 61.4 69.7
 LEU-344   VAL-345  15.5 16.9 11.5 -10.4 107.4 110.5 15.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-984   GLY-985  10.7 9.9 -0.4 -9.5 21.6 16.2 39.8
 GLY-985   VAL-986  12.3 11.4 17.0 -14.5 127.6 127.8 -14.5
 VAL-986   MET-987  9.4 8.5 -1.9 -10.3 82.1 85.8 16.3
 MET-987   PRO-988  7.2 6.0 5.6 -3.4 163.0 151.7 -10.4
 PRO-988   LEU-989  8.1 7.0 5.9 -3.1 116.6 125.6 -9.4
 LEU-989   VAL-990  6.4 5.2 11.3 -0.9 76.6 76.0 21.6
 VAL-990   ILE-991  3.2 2.1 -14.5 -3.3 66.5 68.4 43.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-996   SER-997  5.3 3.8 -11.4 0.8 16.5 17.4 44.3
 SER-997   GLY-998  3.1 1.6 -4.6 -0.7 64.5 73.0 22.8
 GLY-998   ALA-999  5.2 4.1 -1.5 -0.3 57.7 62.1 5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees