Dnaj Homolog Subfamily B Member 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-255   TYR-256  4.4 4.9 5.5 -0.4 60.0 60.8 60.7
 TYR-256   PRO-257  1.3 1.6 11.3 -9.3 41.6 35.7 -14.4
 PRO-257   ALA-258  2.6 2.5 0.7 -4.0 77.7 74.9 -19.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-270   VAL-271  13.9 13.9 -5.3 13.2 76.9 68.7 -119.4
 VAL-271   ASN-272  10.2 10.1 2.6 -3.8 43.1 43.8 32.8
 ASN-272   VAL-273  9.6 9.7 -6.7 -0.8 93.6 92.5 73.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-274   THR-275  6.4 5.8 -2.2 -1.5 49.4 38.6 43.3
 THR-275   LEU-276  5.5 4.8 11.4 2.6 87.1 93.2 36.8
 LEU-276   ASP-277  7.3 6.0 -17.2 14.5 59.7 70.6 28.5
 ASP-277   GLY-278  9.6 8.8 23.4 -41.2 77.4 57.1 -157.2
 GLY-278   ARG-279  11.0 10.1 40.4 -31.1 95.2 93.8 66.0
 ARG-279   THR-280  9.9 9.9 2.8 19.7 37.8 50.6 160.0
 THR-280   ILE-281  9.5 9.2 11.0 0.9 115.5 123.6 -77.5
 ILE-281   PRO-282  9.0 9.0 11.4 9.1 46.9 52.7 113.3
 PRO-282   VAL-283  11.5 11.6 -0.9 -8.1 79.0 75.0 -36.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-298   GLY-299  5.5 5.9 7.1 -6.3 70.9 66.8 9.1
 GLY-299   GLU-300  2.6 3.0 2.4 -5.0 120.2 119.6 87.0
 GLU-300   GLY-301  0.2 0.5 -9.7 14.4 56.8 56.9 -52.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-314   ILE-315  2.8 3.2 0.3 -1.9 64.6 57.4 6.0
 ILE-315   ILE-316  5.4 5.7 5.4 -14.7 32.8 30.9 -11.5
 ILE-316   GLU-317  5.5 5.7 -5.9 8.6 127.3 128.6 31.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees