Shikimate Kinase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-104
ALA-105
7.3
6.8
0.2
5.8
130.9
129.6
-3.4
ALA-105
GLU-106
7.1
6.3
-6.5
0.3
28.2
34.2
3.2
GLU-106
GLY-107
6.9
5.9
-7.0
6.6
94.9
102.6
4.9
GLY-107
VAL-108
5.3
4.9
-4.3
2.0
94.8
100.8
-1.7
VAL-108
ARG-109
2.1
1.5
2.7
0.9
156.1
146.2
1.8
ARG-109
ARG-110
2.7
1.4
3.8
-8.7
124.5
118.1
1.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-127
LYS-128
2.9
1.6
-6.6
2.2
77.1
83.3
6.2
LYS-128
TYR-129
0.9
2.3
-2.7
-1.1
122.4
124.0
-0.5
TYR-129
ARG-130
2.8
3.6
-7.1
3.7
67.1
66.2
7.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees