Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-114   ALA-115  11.3 11.2 -2.6 14.9 30.3 30.5 -381.1
 ALA-115   ILE-116  13.2 13.2 12.7 -15.6 131.3 132.4 324.1
 ILE-116   HIS-117  10.9 11.0 6.3 -7.6 131.4 134.5 -6.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-182   PHE-183  4.8 4.7 3.2 -0.8 23.3 26.6 87.0
 PHE-183   ALA-184  7.0 7.0 3.6 -2.0 72.2 71.3 -38.3
 ALA-184   GLY-185  6.4 6.4 -5.8 9.6 148.0 147.4 185.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-242   PHE-243  4.7 4.9 3.4 -6.3 64.4 66.8 75.0
 PHE-243   ARG-244  3.4 3.3 -10.0 16.1 75.4 74.5 -45.7
 ARG-244   ASP-245  6.7 6.5 -9.1 4.6 121.5 130.5 166.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-253   PHE-254  4.8 4.6 -5.4 7.0 143.1 149.5 201.5
 PHE-254   ILE-255  6.2 6.1 3.5 2.9 64.5 65.1 -74.0
 ILE-255   ASP-256  4.8 4.7 -2.4 8.2 143.0 140.9 148.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-290   THR-291  10.1 10.0 8.5 -0.6 19.6 23.5 201.9
 THR-291   MET-292  11.4 11.3 -16.2 13.6 124.7 128.6 -79.2
 MET-292   GLN-293  7.9 7.8 12.0 -15.7 81.2 80.8 -102.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-318   ASP-319  3.8 3.6 4.7 -10.6 103.1 100.6 210.9
 ASP-319   PRO-320  0.1 0.0 7.6 -8.1 130.1 131.0 1.6
 PRO-320   ALA-321  3.5 3.4 4.3 6.3 165.4 167.5 -208.4
 ALA-321   PRO-322  2.0 2.0 -2.4 -4.8 71.7 71.4 43.0
 PRO-322   ALA-323  2.2 2.2 7.8 -11.0 77.7 75.8 168.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees