Bacteriophage Phix174 Capsid Proteins Gpf, Gpg, Gpj And 3 Four Nucleotides 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  THR-204   ASP-205  13.4 14.1 -12.6 18.0 109.3 112.2 -14.9  ASP-205   GLN-206  12.1 11.8 -8.5 17.3 126.6 130.0 31.0  GLN-206   GLU-207  15.6 15.1 -34.2 25.8 159.0 155.8 -45.3  GLU-207   ARG-208  15.6 15.8 -30.3 23.4 128.9 123.5 -71.7  ARG-208   ASP-209  12.2 12.2 26.1 -33.4 77.6 68.5 -1.1  ASP-209   TYR-210  14.1 12.3 6.3 -2.1 46.4 37.9 12.6  TYR-210   PHE-211  17.2 15.4 -33.6 37.2 150.6 126.2 31.1  PHE-211   MET-212  16.3 15.7 112.5 -99.4 72.3 103.4 139.3  MET-212   GLN-213  12.7 12.4 92.6 -109.6 96.0 75.6 11.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ARG-233   PRO-234  5.2 5.6 -24.7 -12.6 15.4 14.9 177.6  PRO-234   LEU-235  6.2 6.5 20.9 7.2 91.8 99.3 -48.0  LEU-235   LEU-236  9.1 9.1 -18.1 6.3 58.7 68.6 23.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees