Elongation Factor 1-Alpha

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-91   ALA-92  19.9 21.2 20.3 -49.3 133.8 137.8 63.0
 ALA-92   PRO-93  17.4 19.9 31.6 -17.3 129.6 138.9 -28.0
 PRO-93   GLY-94  19.1 21.7 -7.0 -16.2 23.8 41.8 39.6
 GLY-94   HIS-95  18.9 21.5 -17.0 -4.5 77.7 31.6 42.8
 HIS-95   ARG-96  18.9 22.8 3.4 6.5 102.3 107.8 -21.6
 ARG-96   ASP-97  16.2 20.1 -7.1 12.1 131.1 99.8 9.8
 ASP-97   PHE-98  16.4 21.6 -6.9 -51.5 142.3 155.7 -162.3
 PHE-98   ILE-99  15.0 20.5 52.3 -6.0 95.9 72.5 28.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-102   ILE-103  10.1 16.0 -6.4 18.2 101.1 103.9 3.2
 ILE-103   THR-104  7.2 12.7 0.2 49.0 38.5 21.8 106.5
 THR-104   GLY-105  8.9 13.3 -35.0 8.2 138.0 131.4 -53.8
 GLY-105   THR-106  11.1 14.1 147.1 16.6 37.4 93.7 -287.0
 THR-106   SER-107  10.2 11.2 141.2 -118.6 95.2 61.7 90.7
 SER-107   GLN-108  9.7 8.7 -91.2 -10.0 34.9 173.2 261.1
 GLN-108   ALA-109  7.6 10.2 -167.5 -8.4 103.0 106.5 -99.1
 ALA-109   ASP-110  9.7 10.7 1.8 -8.0 73.9 76.8 5.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-141   THR-142  7.8 7.6 -2.1 -10.0 94.6 91.3 -17.6
 THR-142   LEU-143  4.2 4.5 10.5 -1.6 26.2 30.7 21.2
 LEU-143   GLY-144  3.2 5.6 -4.7 3.9 137.9 141.2 5.5
 GLY-144   VAL-145  5.7 4.8 9.1 -16.0 65.2 58.1 -18.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-238   PRO-239  3.9 2.5 -57.4 16.8 106.0 92.4 -16.3
 PRO-239   THR-240  1.5 2.2 31.0 -15.6 33.9 47.3 -31.0
 THR-240   ASP-241  0.8 3.3 -164.7 169.3 108.3 81.4 34.5
 ASP-241   LYS-242  4.5 7.1 23.1 -49.5 129.4 160.1 92.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-343   VAL-344  1.2 1.3 4.3 1.1 60.3 66.2 8.1
 VAL-344   LEU-345  2.3 2.2 -17.5 13.9 101.1 101.3 2.7
 LEU-345   ASN-346  4.7 4.5 136.3 -82.8 21.2 29.5 146.4
 ASN-346   HIS-347  6.7 6.6 10.0 -5.3 92.2 104.7 5.0
 ASN-346   HIS-347  6.7 6.6 10.0 -5.3 92.2 104.7 5.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-346   HIS-347  6.7 6.6 10.0 -5.3 92.2 104.7 5.0
 ASN-346   HIS-347  6.7 6.6 10.0 -5.3 92.2 104.7 5.0
 HIS-347   PRO-348  8.6 7.6 -21.3 5.1 23.7 8.6 38.4
 PRO-348   GLY-349  9.9 9.0 -69.8 16.9 84.8 47.8 78.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees