Predicted Glycosyltransferases

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   PRO-195  5.0 5.4 8.2 -10.2 115.7 113.5 -2.3
 PRO-195   GLY-196  2.7 2.8 25.3 -59.5 146.2 148.9 23.8
 GLY-196   ALA-197  0.8 0.8 22.4 -88.2 141.2 138.9 64.6
 ALA-197   ASP-198  1.7 1.3 11.6 -6.1 102.6 105.1 11.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-385   ALA-386  9.0 9.4 3.4 -8.5 128.6 128.0 3.8
 ALA-386   ARG-387  5.4 5.8 25.3 20.4 118.6 109.7 -11.9
 ARG-387   THR-388  6.4 6.9 -21.1 16.1 44.2 10.7 0.0
 THR-388   PHE-389  9.0 8.0 18.9 8.1 138.7 130.6 -23.9
 PHE-389   SER-390  7.8 4.8 84.3 -38.5 113.1 87.5 -25.0
 SER-390   TRP-391  4.2 3.7 -169.9 24.7 18.4 26.5 139.6
 TRP-391   ALA-392  3.7 3.4 -30.3 12.5 52.9 55.9 11.5
 ALA-392   ALA-393  7.1 6.9 -1.3 -2.0 54.2 52.5 2.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees