Immunoglobulin Fab Fragment (Mc/pc603)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-10
LEU-11
11.3
11.2
-1.1
-5.3
163.4
159.8
-70.7
LEU-11
SER-12
10.6
11.1
23.6
-14.2
76.7
57.3
19.1
SER-12
VAL-13
8.9
9.2
41.5
-30.4
7.2
15.4
60.9
VAL-13
SER-14
8.0
8.7
-2.8
-6.2
110.6
111.3
-35.1
SER-14
ALA-15
6.2
6.1
175.5
-148.5
63.3
66.5
-28.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-109
LEU-110
8.4
8.5
-8.2
11.5
157.1
156.8
22.8
LEU-110
GLU-111
7.1
7.4
1.9
5.0
94.9
93.0
33.3
GLU-111
ILE-112
4.7
5.3
-9.5
4.5
160.6
172.5
3.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-168
TRP-169
8.4
8.3
28.2
-38.9
177.1
173.3
0.1
TRP-169
THR-170
7.1
6.8
2.4
-2.8
100.2
112.1
49.1
THR-170
ASP-171
6.0
5.6
-28.5
9.5
60.5
67.1
81.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-173
SER-174
5.3
4.5
9.7
7.9
41.6
41.1
120.0
SER-174
LYS-175
5.1
4.6
-42.6
30.6
147.1
146.8
-54.4
LYS-175
ASP-176
6.8
6.7
-4.9
2.8
113.7
112.4
-76.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees