Thymidine Phosphorylase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-66
GLY-67
8.3
8.2
-25.6
36.6
98.6
99.2
15.4
GLY-67
THR-68
9.4
9.3
21.5
-22.3
89.4
79.0
-21.5
THR-68
VAL-69
9.6
9.0
3.4
-7.3
143.1
133.0
55.9
VAL-69
LEU-70
7.8
7.1
-14.2
3.2
92.8
98.6
-35.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-81
VAL-82
13.2
13.0
8.6
-5.1
51.8
46.6
4.3
VAL-82
ASP-83
11.2
11.1
-5.5
4.2
100.5
103.0
42.1
ASP-83
LYS-84
10.1
10.2
5.1
8.6
45.4
44.9
141.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-85
SER-86
8.6
7.7
15.0
-23.9
148.9
151.3
79.8
SER-86
THR-87
9.4
8.6
27.9
-39.0
77.3
77.3
-19.0
THR-87
GLY-88
10.7
10.5
22.8
-0.2
112.0
117.1
-121.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-161
PRO-162
10.3
10.3
10.7
-23.2
102.3
96.8
86.3
PRO-162
ALA-163
13.3
13.6
24.9
-12.3
77.9
87.8
28.2
ALA-163
ASP-164
13.3
13.4
9.8
-12.5
23.0
24.3
-52.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-189
LYS-190
6.7
6.6
-31.2
7.2
91.8
106.5
-68.1
LYS-190
LYS-191
8.6
8.6
15.7
-2.8
106.0
113.3
-31.3
LYS-191
LEU-192
6.8
7.1
12.9
-17.8
51.7
63.0
-51.3
LEU-192
ALA-193
4.1
4.2
18.5
-14.9
36.1
28.6
18.6
ALA-193
GLU-194
6.5
6.4
23.4
-16.0
94.9
89.5
49.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-195
LEU-196
8.0
7.7
-4.9
8.7
143.4
143.5
52.9
LEU-196
ASP-197
8.2
7.9
-13.5
14.9
91.0
91.7
33.2
ASP-197
ALA-198
9.3
9.4
-5.7
-4.4
149.1
146.8
-96.9
ALA-198
LEU-199
8.0
8.1
-23.4
33.9
105.0
113.0
61.8
LEU-199
VAL-200
5.7
5.6
22.0
-26.0
23.0
17.7
-48.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-211
PRO-212
14.1
13.6
23.0
-25.8
21.0
25.9
-40.3
PRO-212
THR-213
16.5
16.0
-10.8
36.2
141.9
138.0
240.5
THR-213
TYR-214
14.4
14.4
-18.2
2.0
79.5
79.8
-21.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-217
GLU-218
9.6
9.4
-3.5
3.7
102.9
102.4
33.4
GLU-218
ALA-219
8.3
8.0
4.6
-4.3
26.1
32.3
0.5
ALA-219
LEU-220
10.5
10.5
13.9
-11.5
40.1
33.8
15.2
LEU-220
ALA-221
9.0
8.8
-4.1
-1.2
86.7
81.6
41.6
LEU-220
ALA-221
9.0
8.8
-4.1
-1.2
86.7
81.6
41.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-220
ALA-221
9.0
8.8
-4.1
-1.2
86.7
81.6
41.6
LEU-220
ALA-221
9.0
8.8
-4.1
-1.2
86.7
81.6
41.6
ALA-221
GLU-222
5.5
5.2
5.6
-2.0
118.3
110.9
-9.7
GLU-222
ALA-223
7.1
7.1
4.3
-13.1
169.4
167.9
122.2
ALA-223
ILE-224
8.2
8.2
15.1
-9.5
59.7
55.5
89.9
ALA-223
ILE-224
8.2
8.2
15.1
-9.5
59.7
55.5
89.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-223
ILE-224
8.2
8.2
15.1
-9.5
59.7
55.5
89.9
ALA-223
ILE-224
8.2
8.2
15.1
-9.5
59.7
55.5
89.9
ILE-224
VAL-225
4.7
4.7
1.2
-2.8
87.9
82.1
39.4
VAL-225
GLY-226
3.9
4.1
16.2
-8.3
47.2
49.0
79.2
GLY-226
VAL-227
7.1
7.2
-0.5
-6.8
159.8
162.1
-72.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-235
THR-236
4.1
4.4
12.8
-2.8
24.3
27.3
74.3
THR-236
ALA-237
3.7
4.0
13.0
0.7
69.9
71.6
56.5
ALA-237
LEU-238
0.7
0.8
9.4
-12.0
2.9
5.7
-14.6
LEU-238
LEU-239
1.3
1.1
1.4
-5.4
74.3
70.7
-50.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-435
ARG-436
1.8
1.0
-3.2
2.1
67.9
68.1
-31.4
ARG-436
ARG-437
2.2
2.6
-13.8
6.1
23.2
20.0
129.6
ARG-437
ILE-438
3.4
3.8
-45.8
56.8
57.3
56.0
-116.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees