Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-106   THR-107  6.0 6.1 -9.1 -3.6 44.3 40.3 37.1
 THR-107   LEU-108  3.3 4.0 -26.0 23.8 117.9 115.7 -17.2
 LEU-108   GLY-109  0.8 1.5 -25.0 7.3 41.7 48.1 45.5
 GLY-109   ILE-110  3.9 4.2 -3.4 14.7 114.1 122.3 13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-211   ASP-212  9.3 9.5 -6.2 17.3 134.5 134.8 38.1
 ASP-212   SER-213  5.8 6.0 18.7 -22.6 118.5 109.8 1.2
 SER-213   LYS-214  2.7 2.6 9.2 2.4 79.3 79.8 35.3
 LYS-214   GLY-215  1.1 1.1 -27.5 23.2 40.3 48.5 9.5
 GLY-215   TYR-216  4.0 4.3 -19.9 11.0 74.1 69.2 31.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees