Udp-N-Acetylglucosamine Pyrophosphorylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-14   LYS-15  10.0 9.9 1.8 -22.4 167.0 157.3 300.3
 LYS-15   GLY-16  10.6 10.8 38.0 -27.2 119.1 124.5 -81.6
 GLY-16   THR-17  7.3 7.4 7.6 -7.1 158.9 157.5 -24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-33   ALA-34  11.4 11.4 15.9 -11.7 94.8 94.9 -0.7
 ALA-34   MET-35  8.5 8.6 1.6 -0.3 145.2 146.6 -18.2
 MET-35   VAL-36  5.6 5.7 2.6 -2.3 146.3 144.1 -18.5
 VAL-36   GLN-37  6.7 7.0 -3.2 -2.6 67.2 68.7 42.4
 GLN-37   HIS-38  10.0 10.3 -1.2 0.9 51.7 53.1 18.1
 HIS-38   VAL-39  8.9 9.2 -5.1 1.2 24.1 26.1 82.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-64   ALA-65  17.9 18.0 1.5 -10.1 82.0 81.0 16.8
 ALA-65   LEU-66  15.1 15.2 10.5 -7.7 26.1 24.6 35.1
 LEU-66   LYS-67  15.3 15.5 -6.3 5.2 112.3 112.3 14.9
 LYS-67   ASP-68  19.1 19.3 0.4 2.9 50.8 52.9 -12.3
 ASP-68   ASP-69  19.9 20.0 -6.0 0.4 154.1 157.6 -59.2
 ASP-69   ASN-70  17.7 18.0 7.1 -11.1 55.6 61.5 -21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-100   MET-101  5.0 5.0 1.9 -10.4 153.6 153.3 185.5
 MET-101   LEU-102  4.7 4.8 -6.5 4.7 50.5 51.6 -108.7
 LEU-102   TYR-103  3.0 3.0 6.1 -15.2 148.7 150.3 137.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-104   ASP-105  4.0 4.1 -11.2 8.0 134.8 131.4 -40.6
 ASP-105   VAL-106  1.0 0.9 -0.6 0.4 69.9 64.6 21.9
 VAL-106   PRO-107  2.1 2.1 -2.3 0.2 82.3 82.5 8.7
 PRO-107   LEU-108  4.9 5.0 0.3 4.3 122.4 120.5 -17.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-226   ASN-227  3.7 3.8 -10.1 13.0 67.7 67.4 -33.9
 ASN-227   ASN-228  5.3 5.5 -7.5 5.2 5.1 5.8 48.2
 ASN-228   ARG-229  5.0 5.2 7.2 -10.2 98.9 101.4 34.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees