Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-9
THR-10
18.6
18.6
-9.6
11.9
99.4
98.9
109.4
THR-10
ILE-11
16.8
16.8
-1.2
4.7
112.6
110.1
139.5
ILE-11
LEU-12
17.9
17.9
9.7
-11.0
44.8
46.1
-14.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-16
VAL-17
10.4
10.3
-9.2
6.6
62.9
61.0
128.8
VAL-17
MET-18
12.6
12.6
1.7
-1.1
137.0
136.8
50.6
MET-18
TYR-19
14.0
13.8
0.9
-7.7
131.4
134.6
1.2
TYR-19
ARG-20
15.6
15.5
-1.6
3.5
46.7
43.9
76.5
ARG-20
LYS-21
13.0
12.9
25.8
-17.1
148.6
145.0
-422.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-32
GLU-33
13.7
13.6
11.1
-8.1
83.6
84.8
-233.2
GLU-33
GLY-34
10.1
10.0
-6.0
5.0
48.3
48.1
-51.0
GLY-34
TYR-35
8.2
8.1
-1.4
-5.3
41.6
45.9
272.7
TYR-35
CYS-36
6.0
5.9
4.4
1.7
123.4
124.9
-149.7
CYS-36
LEU-37
8.1
8.1
-5.8
2.2
116.9
116.6
-74.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-55
VAL-56
20.9
20.9
-1.8
3.8
40.8
44.1
-117.8
VAL-56
PRO-57
22.5
22.5
-0.8
14.0
107.1
111.2
234.4
PRO-57
ASP-58
26.2
26.3
-15.8
5.5
78.5
81.5
-14.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-61
GLY-62
20.0
19.9
7.7
-9.5
30.5
30.5
-49.5
GLY-62
ALA-63
21.3
21.4
3.2
1.7
42.4
41.1
302.3
ALA-63
GLN-64
23.4
23.3
-3.5
-11.2
120.7
119.8
-26.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-86
ALA-87
12.1
12.1
-2.1
-2.3
119.9
117.4
105.9
ALA-87
PRO-88
12.4
12.2
4.2
3.0
122.0
127.1
-157.4
PRO-88
LEU-89
12.0
11.9
-1.9
3.0
35.0
35.9
-43.6
LEU-89
THR-90
13.4
13.3
-8.8
13.0
37.4
37.2
-126.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-99
ASP-100
16.5
16.6
-10.2
8.2
74.7
79.6
12.6
ASP-100
PHE-101
13.5
13.5
22.5
-22.7
37.6
37.2
-0.2
PHE-101
SER-102
10.6
10.4
4.9
-13.5
89.6
88.9
455.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-103
PRO-104
4.3
4.1
-5.0
6.6
31.6
35.5
84.1
PRO-104
PHE-105
4.1
4.0
2.9
-15.4
140.5
140.5
31.9
PHE-105
MET-106
2.9
2.7
11.1
-11.3
111.2
115.5
95.6
MET-106
THR-107
5.2
5.0
-6.7
-4.1
39.0
40.7
337.5
MET-106
THR-107
5.2
5.0
-6.7
-4.1
39.0
40.7
337.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
5.2
5.0
-6.7
-4.1
39.0
40.7
337.5
MET-106
THR-107
5.2
5.0
-6.7
-4.1
39.0
40.7
337.5
THR-107
LEU-108
7.6
7.5
-10.9
10.1
112.9
114.3
154.6
LEU-108
GLY-109
11.4
11.2
20.7
-10.1
141.9
136.6
-299.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
19.4
19.5
22.0
-29.0
54.7
55.1
-225.9
ASP-212
SER-213
16.0
16.0
-19.7
19.5
63.0
58.3
163.6
SER-213
LYS-214
12.3
12.3
0.0
24.6
93.7
88.5
-198.9
LYS-214
GLY-215
10.2
10.8
-21.4
6.2
34.8
50.1
536.3
GLY-215
TYR-216
8.1
8.1
-4.7
-10.6
65.8
65.3
-123.0
TYR-216
GLY-217
8.6
8.4
5.3
-8.5
77.9
79.6
103.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-224
PRO-225
17.8
17.9
1.1
1.8
92.8
91.9
9.1
PRO-225
TYR-226
17.8
17.9
-8.4
4.6
136.3
130.9
-59.1
TYR-226
ARG-227
15.4
15.4
-8.5
22.5
73.6
72.3
26.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-228
LYS-229
11.2
11.5
0.8
-2.2
141.1
142.6
68.0
LYS-229
ILE-230
12.5
12.8
-0.7
2.8
49.2
50.3
-95.4
ILE-230
THR-231
10.0
10.2
-0.3
-4.5
109.3
109.9
277.1
THR-231
ILE-232
7.1
7.4
-0.6
3.9
103.0
102.1
210.0
THR-231
ILE-232
7.1
7.4
-0.6
3.9
103.0
102.1
210.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-231
ILE-232
7.1
7.4
-0.6
3.9
103.0
102.1
210.0
THR-231
ILE-232
7.1
7.4
-0.6
3.9
103.0
102.1
210.0
ILE-232
ALA-233
8.7
8.9
3.6
-6.6
15.4
15.7
-102.5
ALA-233
ILE-234
8.7
8.9
5.4
-1.0
76.9
75.9
39.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees