Protein (Surface Antigen Psaa)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-185   GLU-186  11.9 12.4 -4.4 -8.7 62.4 70.3 31.2
 GLU-186   SER-187  11.0 11.4 23.3 -33.4 66.3 66.0 22.5
 SER-187   LYS-188  7.8 8.4 25.7 2.2 27.6 18.7 335.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-205   GLY-206  13.0 12.9 3.8 0.8 106.9 111.5 -35.9
 GLY-206   ALA-207  9.9 10.0 0.9 3.9 76.8 71.3 26.7
 ALA-207   PHE-208  8.9 8.5 16.6 -1.4 73.7 82.3 96.2
 PHE-208   LYS-209  5.2 4.9 -10.0 10.9 44.6 40.0 -33.0
 LYS-209   TYR-210  3.7 3.8 -16.4 5.1 100.5 107.0 1.9
 TYR-210   PHE-211  4.0 4.0 -9.3 9.7 128.5 128.4 24.3
 PHE-211   SER-212  1.3 1.5 -4.9 8.4 56.0 58.3 5.2
 SER-212   LYS-213  1.4 1.3 -10.1 3.1 60.1 63.4 13.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-216   VAL-217  6.4 6.1 14.5 -16.8 101.2 107.1 -41.1
 VAL-217   PRO-218  6.0 6.0 14.4 -1.0 53.3 61.0 71.4
 PRO-218   SER-219  6.0 5.9 2.7 -33.2 116.9 125.7 84.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-221   ILE-222  12.5 12.2 0.9 -7.3 113.6 110.7 3.8
 ILE-222   TRP-223  16.0 15.8 -5.4 13.5 49.4 54.6 -58.6
 TRP-223   GLU-224  15.8 15.7 -2.8 8.9 85.4 88.2 -161.5
 GLU-224   ILE-225  13.6 13.0 157.7 -87.0 63.9 55.9 467.2
 ILE-225   ASN-226  13.9 14.6 4.7 -117.7 124.0 66.5 -39.4
 ASN-226   THR-227  17.4 17.4 -57.2 17.8 60.4 61.7 294.1
 THR-227   GLU-228  18.8 19.8 -140.8 -20.5 117.3 54.4 6.3
 GLU-228   GLU-229  22.6 20.0 -137.5 41.3 126.7 124.1 -625.9
 GLU-229   GLU-230  23.4 22.5 29.0 -7.4 63.8 56.7 159.5
 GLU-230   GLY-231  21.2 20.9 -21.2 9.9 113.6 103.1 -51.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-276   ILE-277  10.9 11.0 -3.8 1.1 84.6 82.5 8.0
 ILE-277   PHE-278  8.1 8.0 32.2 -42.7 102.1 108.2 57.0
 PHE-278   THR-279  8.4 8.2 -28.3 3.9 15.1 24.0 224.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-297   TYR-298  2.5 2.5 6.4 -7.2 96.6 97.9 3.0
 TYR-298   ASN-299  1.4 1.4 -1.1 9.1 149.9 147.2 27.8
 ASN-299   LEU-300  2.4 2.3 4.0 5.1 68.1 75.7 57.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees