Mannitol Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-87   LEU-88  12.5 12.5 1.2 -0.8 7.3 10.6 -19.3
 LEU-88   GLY-89  11.0 11.0 6.2 -8.2 70.3 70.7 9.1
 GLY-89   ASP-90  10.5 10.3 3.6 10.2 22.1 23.9 233.5
 ASP-90   THR-91  11.1 11.0 66.4 -38.6 85.5 82.8 189.1
 THR-91   ASP-92  13.8 14.6 127.6 0.3 144.8 114.2 -1925.6
 ASP-92   ASP-93  15.0 17.8 -140.7 63.9 75.5 11.3 844.3
 ASP-93   THR-94  17.8 17.6 -59.7 18.1 43.8 54.0 547.4
 THR-94   GLU-95  16.2 16.0 -11.2 1.6 68.1 63.6 26.6
 GLU-95   VAL-96  18.1 17.9 -5.5 2.6 74.1 71.4 73.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-128   LEU-129  2.7 2.6 1.4 -1.7 62.0 61.7 23.5
 LEU-129   THR-130  2.2 2.2 -3.6 3.3 173.1 171.7 20.7
 THR-130   ILE-131  3.3 3.3 8.2 -8.7 91.4 91.3 -10.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-133   GLY-134  8.9 8.7 4.3 -6.1 56.6 58.4 -43.6
 GLY-134   GLY-135  12.0 11.9 10.5 -4.7 28.1 33.2 118.8
 GLY-135   TYR-136  10.6 10.5 -1.0 3.0 147.3 152.5 36.1
 TYR-136   CYS-137  10.8 10.8 1.8 -2.1 67.4 66.6 -78.9
 CYS-137   ILE-138  14.6 14.5 1.2 -9.2 74.5 71.0 -177.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-144   PHE-145  20.2 19.7 10.9 -7.9 92.7 100.2 126.9
 ALA-147   HIS-148  19.8 19.5 1.0 -12.2 99.1 94.5 33.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-188   CYS-189  2.8 2.9 -0.7 -0.7 147.4 146.9 -19.8
 CYS-189   ASP-190  2.1 2.2 -4.5 4.6 134.8 137.6 44.1
 ASP-190   ASN-191  3.5 3.5 -3.0 -1.9 117.3 113.4 -35.0
 ASN-191   LEU-192  6.1 6.2 3.5 -6.8 109.7 105.5 -24.0
 LEU-192   PRO-193  9.3 9.4 4.6 -14.9 92.3 104.9 -45.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-231   ILE-232  5.5 5.3 6.6 -7.1 64.9 62.1 -64.7
 ILE-232   THR-233  3.0 3.0 3.0 -2.8 94.0 94.0 52.7
 THR-233   PRO-234  4.4 4.5 8.4 -2.8 70.4 69.5 39.5
 THR-236   SER-237  12.1 12.2 48.9 -63.5 62.4 34.2 -297.9
 SER-237   THR-238  13.8 14.1 -22.1 -0.4 104.3 102.3 -25.2
 THR-238   ALA-239  17.1 17.5 -1.4 3.3 131.4 132.7 22.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-282   GLN-283  14.6 14.5 -3.8 0.5 73.7 72.4 47.3
 GLN-283   PHE-284  16.0 16.0 -14.7 17.2 39.9 40.6 10.7
 PHE-284   THR-285  16.2 16.2 1.6 3.7 85.8 83.5 -19.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-286   ASP-287  18.6 19.2 31.1 -19.2 99.7 107.6 1.8
 ASP-287   VAL-288  17.5 18.3 2.3 1.6 156.4 145.8 -86.8
 VAL-288   THR-289  15.0 15.3 -4.2 6.6 62.1 55.3 -89.7
 THR-289   PRO-290  15.3 16.6 -6.9 5.9 25.3 15.5 5.4
 PRO-290   TYR-291  17.5 18.2 -8.9 2.1 45.1 55.7 134.5
 TYR-291   GLU-292  15.0 15.1 -0.5 2.2 83.0 81.3 39.9
 GLU-292   GLU-293  12.0 12.8 -5.4 -5.4 62.6 50.5 151.1
 LYS-295   ILE-296  11.2 11.5 -1.4 -6.3 85.0 86.1 62.1
 ILE-296   GLY-297  10.7 10.9 2.6 -0.8 134.1 132.8 -11.5
 GLY-297   LEU-298  13.9 14.0 1.4 1.0 163.8 161.5 -73.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees