Hypothetical Protein Pa5026

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-61   PRO-62  8.2 8.4 -7.7 -4.3 38.7 42.3 65.6
 PRO-62   GLY-63  5.6 5.6 1.5 3.9 84.8 78.7 12.7
 GLY-63   GLY-64  6.1 5.8 -7.5 2.0 69.2 67.8 23.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-80   LYS-81  8.2 8.4 -8.3 6.8 25.7 17.1 6.6
 LYS-81   GLU-82  8.1 7.9 0.3 -8.5 126.9 119.3 33.4
 GLU-82   MET-83  4.5 4.2 8.1 16.9 51.4 46.7 120.1
 MET-83   THR-84  1.0 1.0 -0.1 -6.2 57.0 57.2 14.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-99   ARG-100  1.4 1.5 -18.3 11.6 42.8 41.4 39.3
 ARG-100   LEU-101  1.8 1.9 -6.2 -23.9 109.7 111.4 -44.8
 LEU-101   ASP-102  5.5 5.4 -23.9 7.1 26.2 27.7 124.6
 ASP-102   ALA-103  7.7 7.3 -0.9 -4.1 76.1 89.9 8.1
 ALA-103   GLU-104  9.8 10.0 8.8 1.7 63.2 72.1 18.2
 GLU-104   ARG-105  13.0 12.7 -2.7 1.6 160.8 172.2 -8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-122   LEU-123  6.1 6.3 9.7 6.5 48.8 44.1 81.9
 LEU-123   GLU-124  2.9 3.2 -10.1 6.2 57.7 60.9 23.2
 GLU-124   LEU-125  4.5 4.5 4.6 2.6 51.7 49.6 37.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-138   ALA-139  4.7 4.6 -5.1 2.0 76.0 77.8 26.4
 ALA-139   ALA-140  3.3 3.2 -2.0 17.2 111.6 110.2 60.6
 ALA-140   LEU-141  2.2 2.2 -18.6 13.0 73.1 84.1 47.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees