Aminoglycoside N3-Acetyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-72   ASP-73  9.6 9.7 1.7 11.5 48.4 44.2 75.6
 ASP-73   LEU-74  8.7 8.8 -10.6 -2.3 88.8 83.2 -30.4
 LEU-74   SER-75  5.1 5.2 -5.2 6.5 45.0 41.1 -47.6
 SER-75   ASP-76  6.2 6.1 -2.2 10.7 104.3 102.5 101.3
 ASP-76   PRO-77  7.5 7.5 5.1 0.4 78.1 76.6 39.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-92   ILE-93  10.3 10.6 -3.7 8.3 99.0 100.5 -23.8
 ILE-93   ARG-94  7.6 7.9 -0.7 3.1 123.3 122.7 15.5
 ARG-94   ASP-95  6.8 6.9 -6.5 6.8 60.2 59.5 -9.7
 ASP-95   ASN-96  7.6 7.7 -1.4 1.8 45.6 45.2 30.6
 ASN-96   VAL-97  4.9 5.0 2.4 -1.2 84.6 81.0 -25.5
 VAL-97   PRO-98  2.4 2.7 -1.7 8.8 96.7 94.6 65.0
 PRO-98   ALA-99  1.3 1.2 -5.9 6.4 151.7 151.7 2.3
 ALA-99   PHE-100  3.6 3.5 -3.7 7.0 94.1 93.6 -91.3
 PHE-100   GLU-101  6.0 5.9 -6.9 2.6 78.6 77.4 37.6
 GLU-101   PRO-102  9.4 9.3 -1.9 -1.8 96.9 96.2 -24.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-197   GLY-198  5.4 5.5 1.1 0.0 56.8 55.6 18.7
 GLY-198   ALA-199  3.6 3.7 8.0 -9.1 45.0 45.9 37.2
 ALA-199   PRO-200  1.1 1.2 -9.8 4.8 119.1 119.4 -34.7
 PRO-200   ILE-201  1.6 1.5 1.0 3.1 95.3 95.8 2.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-209   LYS-210  5.1 5.0 0.2 -1.1 13.4 12.9 5.5
 LYS-210   GLU-211  4.5 4.5 -2.6 4.6 123.4 127.4 -144.2
 GLU-211   PHE-212  4.6 4.7 -0.1 3.4 146.1 146.3 108.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees